RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 NAF1Q96HR8 494 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 ERVMER34-1Q9H9K5 563 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 GDF3Q9NR23 364 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 CLCA2Q9UQC9 943 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 UBE4BO95155 1302 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 TLR4O00206 839 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 TRIM38O00635 465 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 MID1O15344 667 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 YKT6O15498 198 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 SIN3BO75182 1162 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 KIF20AO95235 890 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 MT-CO3P00414 261 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 HLA-DRAP01903 254 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 C6P13671 934 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 P4HA1P13674 534 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 YWHAGP61981 247 aaKnown RBP eCLIP13.08□□□□□ -0.32
PSEN1-221ENST00000557293 KCNC4Q03721 635 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 TTC31Q49AM3 519 aaPredicted RBP13.08□□□□□ -0.32
PSEN1-221ENST00000557293 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 PM20D1Q6GTS8 502 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 KDM7AQ6ZMT4 941 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 UNC13DQ70J99 1090 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 OR2T34Q8NGX1 318 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 TMEM174Q8WUU8 243 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 MRGPRX3Q96LB0 322 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 LRRC27Q9C0I9 530 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 SLC39A2Q9NP94 309 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
PSEN1-221ENST00000557293 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 NCKAP1Q9Y2A7 1128 aa13.08□□□□□ -0.32
PSEN1-221ENST00000557293 A0A1W2PP55 124 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-221ENST00000557293 WISP1O95388 367 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 KRT10P13645 584 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
PSEN1-221ENST00000557293 CST6Q15828 149 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 HNRNPA1L2Q32P51 320 aaKnown RBP13.07□□□□□ -0.32
PSEN1-221ENST00000557293 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 ADGRF1Q5T601 910 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 C9orf64Q5T6V5 341 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 SLC9A9Q8IVB4 645 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 AHI1Q8N157 1196 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 SLC25A45Q8N413 288 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 SKA1Q96BD8 255 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 LGMNQ99538 433 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 CYP3A43Q9HB55 503 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 ARHGAP20Q9P2F6 1191 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 STRIP2Q9ULQ0 834 aa13.07□□□□□ -0.32
PSEN1-221ENST00000557293 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-221ENST00000557293 SPTA1P02549 2419 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 GOLGA6L7A0A1B0GV03 622 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 TULP2O00295 520 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 IKBKBO14920 756 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 LATO43561 262 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 SIGLEC6O43699 453 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 DXOO77932 396 aaKnown RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 ATP5BP06576 529 aaKnown RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 POLR2EP19388 210 aaKnown RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 ARRB1P49407 418 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 E2F1Q01094 437 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 PIK3R6Q5UE93 754 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 GANCQ8TET4 914 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 MYEOVQ96EZ4 313 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 SERAC1Q96JX3 654 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 ZNF578Q96N58 590 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 BLZF1Q9H2G9 400 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 CUEDC2Q9H467 287 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 CAAP1Q9H8G2 361 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 SFMBT1Q9UHJ3 866 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
PSEN1-221ENST00000557293 HBS1LQ9Y450 684 aaKnown RBP13.06□□□□□ -0.32
PSEN1-221ENST00000557293 RNASEH2AO75792 299 aaKnown RBP13.05□□□□□ -0.32
PSEN1-221ENST00000557293 CLSTN1O94985 981 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 MPOP05164 745 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 SLC6A4P31645 630 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 SLC8A1P32418 973 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
PSEN1-221ENST00000557293 PCBP4P57723 403 aaKnown RBP13.05□□□□□ -0.32
PSEN1-221ENST00000557293 TMPRSS3P57727 454 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 PPP2CBP62714 309 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms