RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MRPL4Q9BYD3 311 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 TMEM117Q9H0C3 514 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ABHD16BQ9H3Z7 469 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 PDGFCQ9NRA1 345 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ARGLU1Q9NWB6 273 aaPredicted RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 UCKL1Q9NWZ5 548 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 RAB20Q9NX57 234 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TNFRSF18Q9Y5U5 241 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SIPA1L1O43166 1804 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 BRCA2P51587 3418 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ATP8B3O60423 1300 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 A0A0U1RQJ8 604 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 RRN3P2A6NIE6 340 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 LRRIQ3A6PVS8 624 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 TISP43B9A030 160 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 ACKR2O00590 384 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 ATP8B1O43520 1251 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 RRP9O43818 475 aaKnown RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 ARIH2O95376 493 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 MOCS3O95396 460 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 SNAI1O95863 264 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 DLATP10515 647 aaKnown RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 PYGMP11217 842 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 FGFR1P11362 822 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 GZMAP12544 262 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 TNNI1P19237 187 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 MAKP20794 623 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 KLRC1P26715 233 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 GJA4P35212 333 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 PAFAH1B1P43034 410 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 MATR3P43243 847 aaKnown RBP eCLIP4.75□□□□□ -1.65
SRP54-212ENST00000556992 GCNT1Q02742 428 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 MAP2K1Q02750 393 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 ITIH3Q06033 890 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 ARHGAP1Q07960 439 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 IFRD2Q12894 506 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 ACVR2BQ13705 512 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 GRB14Q14449 540 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 CLUL1Q15846 466 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 DGKDQ16760 1214 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 ARHGAP44Q17R89 818 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 CFAP221Q4G0U5 840 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 DUSP28Q4G0W2 176 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 EFCAB12Q6NXP0 572 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 PPP1R2P3Q6NXS1 205 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 SLC39A4Q6P5W5 647 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 GJB7Q6PEY0 223 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 Q6ZPA2 131 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 TSHZ1Q6ZSZ6 1077 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 RSRC2Q7L4I2 434 aaKnown RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 TRAPPC11Q7Z392 1133 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 APBB1IPQ7Z5R6 666 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 GPR142Q7Z601 462 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 FBXO16Q8IX29 292 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 FAM71AQ8IYT1 594 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 SYCE1Q8N0S2 351 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 METTL13Q8N6R0 699 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 RNF149Q8NC42 400 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 U2AF1L4Q8WU68 220 aaKnown RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 ATRIPQ8WXE1 791 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 TAF4BQ92750 862 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 MAML3Q96JK9 1138 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 NT5C1BQ96P26 610 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 ACO2Q99798 780 aaKnown RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 TTPALQ9BTX7 342 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 TARS2Q9BW92 718 aaKnown RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 NFKBIZQ9BYH8 718 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 R3HDMLQ9H3Y0 253 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 FZD8Q9H461 694 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 RNPEPQ9H4A4 650 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 RBAKQ9NYW8 714 aaPredicted RBP4.75□□□□□ -1.65
SRP54-212ENST00000556992 TRIM10Q9UDY6 481 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 CBLCQ9ULV8 474 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 SNX12Q9UMY4 172 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 FER1L6Q2WGJ9 1857 aa4.75□□□□□ -1.65
SRP54-212ENST00000556992 ANKRD62A6NC57 917 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CES2O00748 559 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 OGTO15294 1046 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 KPNA6O60684 536 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 RTN2O75298 545 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ERLIN1O75477 346 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PALMO75781 387 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 IL18RAPO95256 599 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 MPIG6BO95866 241 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 C4BPAP04003 597 aaKnown RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 ATP1A1P05023 1023 aaKnown RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 LGALS2P05162 132 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ADRB2P07550 413 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CLTAP09496 248 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 TBXAS1P24557 533 aaPredicted RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 MARK3P27448 753 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 USP8P40818 1118 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CTCFP49711 727 aaPredicted RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 ACOT2P49753 483 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 GALCP54803 685 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PTENP60484 403 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 GPC5P78333 572 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 TNFAIP2Q03169 654 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 MCL1Q07820 350 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CRHR2Q13324 411 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms