RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 HS6ST3Q8IZP7 471 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 PLD5Q8N7P1 536 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 GRK7Q8WTQ7 553 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 SLCO2A1Q92959 643 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 ANKZF1Q9H8Y5 726 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 SFXN1Q9H9B4 322 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 FEZ2Q9UHY8 353 aaPredicted RBP24.52■■□□□ 1.52
SIX4-203ENST00000556952 DENND4AQ7Z401 1863 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 HELZP42694 1942 aaKnown RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 FAM72CH0Y354 149 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 LIASO43766 372 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 MOCS2O96007 188 aaPredicted RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 DR1Q01658 176 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 OTUD4Q01804 1114 aaKnown RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 SMAD4Q13485 552 aaKnown RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 FAM72AQ5TYM5 149 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 PTCRAQ6ISU1 281 aaPredicted RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 FAM72DQ6L9T8 149 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 FAM72BQ86X60 149 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 CCDC105Q8IYK2 499 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 ACTL9Q8TC94 416 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 P3H4Q92791 437 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 NKD2Q969F2 451 aaPredicted RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 ASB2Q96Q27 587 aa24.51■■□□□ 1.51
SIX4-203ENST00000556952 USP15Q9Y4E8 981 aaPredicted RBP24.51■■□□□ 1.51
SIX4-203ENST00000556952 DAPK3O43293 454 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 LRIG2O94898 1065 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 TUBBP07437 444 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 IL9P15248 144 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 NR2C2P49116 596 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 LMNB2Q03252 620 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 NOMO1Q15155 1222 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 MANEALQ5VSG8 457 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 SLC35B2Q8TB61 432 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 HAUS1Q96CS2 278 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 PRKD2Q9BZL6 878 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 TRPC7Q9HCX4 862 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 STIM2Q9P246 746 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 HS3ST4Q9Y661 456 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 FAM187AA6NFU0 413 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 PAPLNO95428 1278 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 HMBSP08397 361 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 MYL4P12829 197 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 AMPD1P23109 780 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 DDX6P26196 483 aaKnown RBP eCLIP24.5■■□□□ 1.51
SIX4-203ENST00000556952 HOXC13P31276 330 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 SNX1Q13596 522 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 BYSLQ13895 437 aaKnown RBP24.5■■□□□ 1.51
SIX4-203ENST00000556952 AAK1Q2M2I8 961 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 NCBP2-AS2Q69YL0 99 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 ATL2Q8NHH9 583 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 KLF16Q9BXK1 252 aaPredicted RBP24.5■■□□□ 1.51
SIX4-203ENST00000556952 RNF38Q9H0F5 515 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 SIK2Q9H0K1 926 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 ATXN3LQ9H3M9 355 aa24.5■■□□□ 1.51
SIX4-203ENST00000556952 MCF2LO15068 1137 aa24.49■■□□□ 1.51
SIX4-203ENST00000556952 PECAM1P16284 738 aaPredicted RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 HARS2P49590 506 aaKnown RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 VCPP55072 806 aaKnown RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 MLLT6P55198 1093 aaPredicted RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 PIK3R6Q5UE93 754 aa24.49■■□□□ 1.51
SIX4-203ENST00000556952 PDZD4Q76G19 769 aaPredicted RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 AZIN2Q96A70 460 aa24.49■■□□□ 1.51
SIX4-203ENST00000556952 ZNF707Q96C28 371 aaPredicted RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 TBC1D31Q96DN5 1066 aa24.49■■□□□ 1.51
SIX4-203ENST00000556952 ADAM7Q9H2U9 754 aa24.49■■□□□ 1.51
SIX4-203ENST00000556952 XPO7Q9UIA9 1087 aaKnown RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 DNPEPQ9ULA0 475 aa24.49■■□□□ 1.51
SIX4-203ENST00000556952 DRG1Q9Y295 367 aaKnown RBP24.49■■□□□ 1.51
SIX4-203ENST00000556952 CCDC195A0A1B0GUA6 201 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 A0A1W2PRU2 124 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 SOBPA7XYQ1 873 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 DCLK1O15075 740 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 FGF10O15520 208 aaPredicted RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 TTI1O43156 1089 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 ECEL1O95672 775 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 MBL2P11226 248 aaPredicted RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 BMP1P13497 986 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 MCM3P25205 808 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 EPHB2P29323 1055 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 CYP4F8P98187 520 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 PAFAH1B3Q15102 231 aaKnown RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 OASLQ15646 514 aaKnown RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 MS4A13Q5J8X5 152 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 TXNDC8Q6A555 127 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 SYDE1Q6ZW31 735 aaPredicted RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 BZW1Q7L1Q6 419 aaKnown RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 SUSD6Q92537 303 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 FAM118BQ9BPY3 351 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 HCFC1R1Q9NWW0 138 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 DNMT3BQ9UBC3 853 aaKnown RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 SAE1Q9UBE0 346 aaPredicted RBP24.48■■□□□ 1.51
SIX4-203ENST00000556952 NEU3Q9UQ49 428 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 SNX10Q9Y5X0 201 aa24.48■■□□□ 1.51
SIX4-203ENST00000556952 DOCK4Q8N1I0 1966 aa24.47■■□□□ 1.51
SIX4-203ENST00000556952 TRAV19A0A0A6YYK7 116 aa24.47■■□□□ 1.51
SIX4-203ENST00000556952 HEXIM1O94992 359 aaKnown RBP24.47■■□□□ 1.51
SIX4-203ENST00000556952 GAS8O95995 478 aa24.47■■□□□ 1.51
SIX4-203ENST00000556952 ITGAVP06756 1048 aa24.47■■□□□ 1.51
SIX4-203ENST00000556952 RHOP08100 348 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms