RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NDST4Q9H3R1 872 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 POPDC2Q9HBU9 364 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ELOVL2Q9NXB9 296 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 CACNA2D2Q9NY47 1150 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 FBXO10Q9UK96 956 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 BCLAF3A2AJT9 711 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 SLC30A4O14863 429 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TSPAN3O60637 253 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 APOEP02649 317 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 CISD3P0C7P0 127 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 SLC2A3P11169 496 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 PON1P27169 355 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ATXN3P54252 364 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 RPL6Q02878 288 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 MTA1Q13330 715 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 NNTQ13423 1086 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 CCDC6Q16204 474 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 SYCP2LQ5T4T6 812 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 DAB2IPQ5VWQ8 1189 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 MSANTD2Q6P1R3 559 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 SASS6Q6UVJ0 657 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 SERPINA13PQ6UXR4 307 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 BEND5Q7L4P6 421 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 RABEPKQ7Z6M1 372 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TMEM110Q86TL2 294 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 RLN3Q8WXF3 142 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 PIGKQ92643 395 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 RNF34Q969K3 372 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 CITED4Q96RK1 184 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 GABRG3Q99928 467 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 NUSAP1Q9BXS6 441 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TJP2Q9UDY2 1190 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 STOML2Q9UJZ1 356 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TLR6Q9Y2C9 796 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 A0A1W2PQF6 199 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 DCDC2BA2VCK2 349 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 MSI1O43347 362 aaKnown RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 ACSL4O60488 711 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 MOCS3O95396 460 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 GLI1P08151 1106 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 POLR2EP19388 210 aaKnown RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 ABCB4P21439 1286 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 EEF1GP26641 437 aaKnown RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 HOXD12P35452 270 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 LIMK1P53667 647 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 ST8SIA6P61647 398 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 CDK17Q00537 523 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 LMAN2Q12907 356 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 RAPGEF1Q13905 1077 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 SF3A2Q15428 464 aaKnown RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 DPCR1Q3MIW9 517 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 HSP90AA4PQ58FG1 418 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 DCAF6Q58WW2 860 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 EFHC1Q5JVL4 640 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 PLA2G2CQ5R387 149 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 LYSMD4Q5XG99 296 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 RNF43Q68DV7 783 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 LRSAM1Q6UWE0 723 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 KIAA1324Q6UXG2 1013 aaKnown RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 CLEC17AQ6ZS10 378 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 BHLHA9Q7RTU4 235 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 SYT12Q8IV01 421 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 TMEFF1Q8IYR6 380 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 AHI1Q8N157 1196 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 MSANTD4Q8NCY6 345 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 OLIG1Q8TAK6 271 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 CEP76Q8TAP6 659 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 WFIKKN2Q8TEU8 576 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 SCG3Q8WXD2 468 aaKnown RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 SHC3Q92529 594 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 PRCCQ92733 491 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 WNT2BQ93097 391 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 PPP1R13BQ96KQ4 1090 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 PPP1R9BQ96SB3 815 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 ACOX2Q99424 681 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 PRDM16Q9HAZ2 1276 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 TMEM51Q9NW97 253 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 CALCOCO1Q9P1Z2 691 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 THAP10Q9P2Z0 257 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-222ENST00000556768 DNAJC12Q9UKB3 198 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 STON1Q9Y6Q2 735 aa7.61□□□□□ -1.19
SCFD1-222ENST00000556768 CACNA1AO00555 2505 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 KCNJ18B7U540 433 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 WASH3PC4AMC7 463 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 E5RJQ4 531 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 GDF9O60383 454 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 EPHX1P07099 455 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 GNSP15586 552 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 GABRG2P18507 467 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 OXTRP30559 389 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 CCR1P32246 355 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 SCTRP47872 440 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 RPL34P49207 117 aaKnown RBP7.6□□□□□ -1.19
SCFD1-222ENST00000556768 SFSWAPQ12872 951 aaKnown RBP7.6□□□□□ -1.19
SCFD1-222ENST00000556768 PDCLQ13371 301 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 CDH18Q13634 790 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 KCNJ12Q14500 433 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms