RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 APBA1Q02410 837 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 PTK2Q05397 1052 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 HSP90AA4PQ58FG1 418 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 FAM133BQ5BKY9 247 aaKnown RBP10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 MPP7Q5T2T1 576 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 RAP1GAP2Q684P5 730 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 NADSYN1Q6IA69 706 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 OR6B2Q6IFH4 312 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 ADIPOR2Q86V24 386 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 CHSY1Q86X52 802 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 PASD1Q8IV76 773 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 FAM114A1Q8IWE2 563 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 LGI2Q8N0V4 545 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 ZCCHC9Q8N567 271 aaKnown RBP10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 ATP6V0D2Q8N8Y2 350 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 MLKLQ8NB16 471 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 FCRL2Q96LA5 508 aaPredicted RBP10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 LHX5Q9H2C1 402 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 PDCL3Q9H2J4 239 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 SYNCQ9H7C4 482 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 CAPN10Q9HC96 672 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 CNTN6Q9UQ52 1028 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
SPTLC2-205ENST00000556607 LAMA1P25391 3075 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 CEP250Q9BV73 2442 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 A0A1B0GTW7 788 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 METTL12A8MUP2 240 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 PAPSS1O43252 624 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 RNASEH1O60930 286 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 GRAP2O75791 330 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 TRUB2O95900 331 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 SPINK2P20155 84 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 NUMBP49757 651 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 YWHAZP63104 245 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 CAMK2GQ13555 558 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 TTC31Q49AM3 519 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 DCAF6Q58WW2 860 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 ZC3H12AQ5D1E8 599 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 MS4A13Q5J8X5 152 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 RNF219Q5W0B1 726 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 CADM4Q8NFZ8 388 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 FIBINQ8TAL6 211 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 STK32AQ8WU08 396 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 AZIN2Q96A70 460 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 PRICKLE1Q96MT3 831 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 NOX5Q96PH1 765 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 SLC4A5Q9BY07 1137 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 BTBD1Q9H0C5 482 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 TMEM245Q9H330 911 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 THAP9Q9H5L6 903 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 FAM204AQ9H8W3 233 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 PRSS16Q9NQE7 514 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 EIF2B4Q9UI10 523 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 DACH1Q9UI36 760 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 CYTH4Q9UIA0 394 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 XPO7Q9UIA9 1087 aaKnown RBP10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 DNAJC12Q9UKB3 198 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 NCKAP1Q9Y2A7 1128 aa10.96□□□□□ -0.65
SPTLC2-205ENST00000556607 PCDH15Q96QU1 1955 aa10.96□□□□□ -0.66
SPTLC2-205ENST00000556607 MUC22E2RYF6 1773 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 FAM170AA1A519 330 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 FAM47DPA6NHR8 397 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 BECN2A8MW95 431 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 F5H5T6 163 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 BCAT2O15382 392 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 FSBPO95073 299 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 LUC7L3O95232 432 aaKnown RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 ABCB4P21439 1286 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 TACR2P21452 398 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 PON1P27169 355 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 ACSL1P33121 698 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 NNMTP40261 264 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 CSKP41240 450 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 SNX16P57768 344 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 SIM1P81133 766 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 CDK17Q00537 523 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 GRIK2Q13002 908 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 SEMA3BQ13214 749 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 PDCLQ13371 301 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 NNTQ13423 1086 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 MAN2A1Q16706 1144 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 PTPRNQ16849 979 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 EFHC1Q5JVL4 640 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 ZNF776Q68DI1 518 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 LRSAM1Q6UWE0 723 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 MMS22LQ6ZRQ5 1243 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 KIAA0907Q7Z7F0 614 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 TMEM110Q86TL2 294 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 DHX40Q8IX18 779 aaKnown RBP10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 DEFB106AQ8N104 65 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 MYEOVQ96EZ4 313 aa10.95□□□□□ -0.66
SPTLC2-205ENST00000556607 PPP1R13BQ96KQ4 1090 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms