RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ABCB4P21439 1286 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 NR2F2P24468 414 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ITPKBP27987 946 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 GTF2H1P32780 548 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 EIF2S3P41091 472 aaKnown RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 RAD23BP54727 409 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 KRT39Q6A163 491 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 GATAD2AQ86YP4 633 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ZNF557Q8N988 423 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 CNDP2Q96KP4 475 aaKnown RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ULBP1Q9BZM6 244 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 RSPH9Q9H1X1 276 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 PRORYQ9H606 182 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 FBXL12Q9NXK8 326 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ZNF462Q96JM2 2506 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 FAM47DPA6NHR8 397 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 LRRC72A6NJI9 287 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 XPO1O14980 1071 aaKnown RBP12.37□□□□□ -0.43
ACTN1-221ENST00000556571 YKT6O15498 198 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
ACTN1-221ENST00000556571 RFPL3O75679 317 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 PRB1P04280 392 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 MYL1P05976 194 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
ACTN1-221ENST00000556571 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
ACTN1-221ENST00000556571 GALCP54803 685 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 ST8SIA6P61647 398 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 SEMG2Q02383 582 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 NFIL3Q16649 462 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 PRAMEF14Q5SWL7 426 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 BHLHA9Q7RTU4 235 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 FAM186BQ8IYM0 893 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 SAP25Q8TEE9 199 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 NDRG1Q92597 394 aaKnown RBP12.37□□□□□ -0.43
ACTN1-221ENST00000556571 SLC6A18Q96N87 628 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
ACTN1-221ENST00000556571 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 MMRN2Q9H8L6 949 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 LRRC4Q9HBW1 653 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 ABCC13Q9NSE7 274 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 SFMBT1Q9UHJ3 866 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
ACTN1-221ENST00000556571 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 IRAK2O43187 625 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 TLX3O43711 291 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-221ENST00000556571 ASLP04424 464 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 CD38P28907 300 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 CD70P32970 193 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 ARRB1P49407 418 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-221ENST00000556571 MCCD1P59942 119 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-221ENST00000556571 TARDBPQ13148 414 aaKnown RBP eCLIP12.36□□□□□ -0.43
ACTN1-221ENST00000556571 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 RTP5Q14D33 572 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 HNRNPA1L2Q32P51 320 aaKnown RBP12.36□□□□□ -0.43
ACTN1-221ENST00000556571 PIK3R6Q5UE93 754 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 NCEH1Q6PIU2 408 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 BAP1Q92560 729 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 EDEM1Q92611 657 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 NEUROG2Q9H2A3 272 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 GDF3Q9NR23 364 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 AASDHPPTQ9NRN7 309 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 HESX1Q9UBX0 185 aa12.36□□□□□ -0.43
ACTN1-221ENST00000556571 TPX2Q9ULW0 747 aaKnown RBP12.36□□□□□ -0.43
ACTN1-221ENST00000556571 YJEFN3A6XGL0 299 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 E7ENQ6 273 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CBX4O00257 560 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 TULP2O00295 520 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 TBL1XO60907 577 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SIN3BO75182 1162 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 C1QL1O75973 258 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 WNT1P04628 370 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SLC11A2P49281 568 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 ACADVLP49748 655 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CCR5P51681 352 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CLDN6P56747 220 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 ILKQ13418 452 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 ADAM9Q13443 819 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 ARID5BQ14865 1188 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SHBQ15464 509 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CST6Q15828 149 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 GOLGA7BQ2TAP0 167 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SLC45A4Q5BKX6 768 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 HES3Q5TGS1 186 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 MFN1Q8IWA4 741 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms