RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SGSHP51688 502 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 AIF1P55008 147 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 TNK2Q07912 1038 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 AUHQ13825 339 aaKnown RBP18■□□□□ 0.47
TUBB3-211ENST00000556536 PDGFRLQ15198 375 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 LRRC38Q5VT99 294 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 FBXL22Q6P050 247 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 PEX26Q7Z412 305 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 TMEM25Q86YD3 366 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 RHOT1Q8IXI2 618 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 ZNF683Q8IZ20 524 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 LGI2Q8N0V4 545 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 TEKT4Q8WW24 435 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 KRT35Q92764 455 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 C1orf74Q96LT6 269 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 PRICKLE1Q96MT3 831 aaPredicted RBP18■□□□□ 0.47
TUBB3-211ENST00000556536 KCTD15Q96SI1 283 aaPredicted RBP18■□□□□ 0.47
TUBB3-211ENST00000556536 EBF3Q9H4W6 596 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 DHX35Q9H5Z1 703 aaKnown RBP18■□□□□ 0.47
TUBB3-211ENST00000556536 HPS4Q9NQG7 708 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 STAU2Q9NUL3 570 aaKnown RBP eCLIP18■□□□□ 0.47
TUBB3-211ENST00000556536 OR12D3Q9UGF7 316 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 AMFRQ9UKV5 643 aa18■□□□□ 0.47
TUBB3-211ENST00000556536 PACSIN2Q9UNF0 486 aaPredicted RBP18■□□□□ 0.47
TUBB3-211ENST00000556536 ARNTLO00327 626 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 KRT7P08729 469 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 L1CAMP32004 1257 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 IRAK1P51617 712 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 MTA1Q13330 715 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 ZNF569Q5MCW4 686 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 LY6G5CQ5SRR4 150 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 RHBDF2Q6PJF5 856 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 TPGS1Q6ZTW0 290 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 POLNQ7Z5Q5 900 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 PSTKQ8IV42 348 aaKnown RBP17.99■□□□□ 0.47
TUBB3-211ENST00000556536 CPXM2Q8N436 756 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 TRIM58Q8NG06 486 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 TTC8Q8TAM2 541 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 IGSF8Q969P0 613 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 OTUB2Q96DC9 234 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 ALS2CR12Q96Q35 445 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 DDX50Q9BQ39 737 aaKnown RBP17.99■□□□□ 0.47
TUBB3-211ENST00000556536 VANGL2Q9ULK5 521 aa17.99■□□□□ 0.47
TUBB3-211ENST00000556536 HELZP42694 1942 aaKnown RBP17.99■□□□□ 0.47
TUBB3-211ENST00000556536 OTOL1A6NHN0 477 aaPredicted RBP17.98■□□□□ 0.47
TUBB3-211ENST00000556536 E9PAM4 449 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 PSTPIP1O43586 416 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 NARSO43776 548 aaKnown RBP17.98■□□□□ 0.47
TUBB3-211ENST00000556536 KIF5CO60282 957 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 SRGAP2O75044 1071 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 CYP17A1P05093 508 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 CD48P09326 243 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 CTNNA2P26232 953 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 CTNNA1P35221 906 aaKnown RBP17.98■□□□□ 0.47
TUBB3-211ENST00000556536 CHKAP35790 457 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 ARSEP51690 589 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 SEMA3BQ13214 749 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 DHCR24Q15392 516 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 DPYSL2Q16555 572 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 MANEALQ5VSG8 457 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 CFAP52Q8N1V2 620 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 SLC35F6Q8N357 371 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 RAPGEF5Q92565 580 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 IRF7Q92985 503 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 ATP2A3Q93084 1043 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 BRD9Q9H8M2 597 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 PCDH18Q9HCL0 1135 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 SPHK2Q9NRA0 654 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 NEU3Q9UQ49 428 aa17.98■□□□□ 0.47
TUBB3-211ENST00000556536 F5H5T6 163 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 DDX3YO15523 660 aaKnown RBP17.97■□□□□ 0.47
TUBB3-211ENST00000556536 CREB3O43889 395 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 LRIG2O94898 1065 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 NFATC1O95644 943 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 PEX5P50542 639 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 RPS24P62847 133 aaKnown RBP17.97■□□□□ 0.47
TUBB3-211ENST00000556536 NRG1Q02297 640 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-211ENST00000556536 TDGQ13569 410 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 RUNX3Q13761 415 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 PPP6R3Q5H9R7 873 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-211ENST00000556536 MEI1Q5TIA1 1274 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 CIR1Q86X95 450 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-211ENST00000556536 ALG3Q92685 438 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 BHMTQ93088 406 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 HES6Q96HZ4 224 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 RPRD1AQ96P16 312 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-211ENST00000556536 ECT2Q9H8V3 914 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 GTSE1Q9NYZ3 720 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 PCDHA3Q9Y5H8 950 aa17.97■□□□□ 0.47
TUBB3-211ENST00000556536 USP34Q70CQ2 3546 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 IGLV3-10A0A075B6K4 115 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 C3orf70A6NLC5 250 aaPredicted RBP17.96■□□□□ 0.47
TUBB3-211ENST00000556536 DRGXA6NNA5 263 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 TBL1XO60907 577 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 CNTN5O94779 1100 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 KRT1P04264 644 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 DNA2P51530 1060 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 CDH6P55285 790 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 MMRN1Q13201 1228 aa17.96■□□□□ 0.47
TUBB3-211ENST00000556536 KRT81Q14533 505 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms