RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 GBP1P32455 592 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 MATKP42679 507 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 SGSHP51688 502 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 MTA1Q13330 715 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 SIM2Q14190 667 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 E2F5Q15329 346 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 OTUD1Q5VV17 481 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 LAIR1Q6GTX8 287 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 ANO7Q6IWH7 933 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 ADGRD1Q6QNK2 874 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 PRR23BQ6ZRT6 265 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 LUZP1Q86V48 1076 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 CHSY1Q86X52 802 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 CHPFQ8IZ52 775 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 MDGA1Q8NFP4 955 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 UCMAQ8WVF2 138 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 CPA5Q8WXQ8 436 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 RUBCNQ92622 972 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 GABRG3Q99928 467 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 POLMQ9NP87 494 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 STAP1Q9ULZ2 295 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 SYNJ2BP-COX16A0A087WUM0 186 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 KCNU1A8MYU2 1149 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 TBL1XO60907 577 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 CCDC172P0C7W6 258 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 FERP16591 822 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 ABCB4P21439 1286 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 HLA-FP30511 346 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 CENPCQ03188 943 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 ARID5AQ03989 594 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 C2CD6Q53TS8 623 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 MS4A13Q5J8X5 152 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 CEP68Q76N32 757 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 ARCQ7LC44 396 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 BAP1Q92560 729 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 NT5C3BQ969T7 300 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-205ENST00000556310 ACOX2Q99424 681 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 NPY6RQ99463 290 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 HINFPQ9BQA5 517 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 TMEM51Q9NW97 253 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 ELOVL2Q9NXB9 296 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 CACNA2D2Q9NY47 1150 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 COX16Q9P0S2 106 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 NCDNQ9UBB6 729 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
SLIRP-205ENST00000556310 GMEB2Q9UKD1 530 aa11.95□□□□□ -0.5
SLIRP-205ENST00000556310 NYNRINQ9P2P1 1898 aaKnown RBP11.95□□□□□ -0.5
SLIRP-205ENST00000556310 SPTBN4Q9H254 2564 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 FAM170AA1A519 330 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 F5H5T6 163 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 GOLGA8SH3BPF8 625 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 M0QYT0 321 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 PABPC1P11940 636 aaKnown RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 UNGP13051 313 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 TACR2P21452 398 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 FLT3P36888 993 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 WASP42768 502 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 NSFP46459 744 aaKnown RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 SULT1E1P49888 294 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 RPS24P62847 133 aaKnown RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 FANCCQ00597 558 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 NME3Q13232 169 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 ENPP2Q13822 863 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 CLEC16AQ2KHT3 1053 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 BRMS1LQ5PSV4 323 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 RAP1GAP2Q684P5 730 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 KIAA0907Q7Z7F0 614 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 MFN1Q8IWA4 741 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 LGI2Q8N0V4 545 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 AHI1Q8N157 1196 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 WFDC5Q8TCV5 224 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 HMGB4Q8WW32 186 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 RNF34Q969K3 372 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 MYEOVQ96EZ4 313 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 PGAP3Q96FM1 320 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 PCDHB18PQ96TA0 734 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 C11orf70Q9BRQ4 267 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 TPSD1Q9BZJ3 242 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms