RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 SLC2A13Q96QE2 648 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 NUP58Q9BVL2 599 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 MKRN2Q9H000 416 aaKnown RBP13.08□□□□□ -0.32
SNX6-207ENST00000556303 PCED1AQ9H1Q7 454 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
SNX6-207ENST00000556303 RRN3Q9NYV6 651 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 DNAJC12Q9UKB3 198 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 SLC6A14Q9UN76 642 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 CYP8B1Q9UNU6 501 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 DAAM1Q9Y4D1 1078 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 KNL1Q8NG31 2342 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 C4orf47A7E2U8 309 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 UPK3BL1B0FP48 263 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 UPK3BL2E5RIL1 263 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 FOXN3O00409 490 aaPredicted RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 ASLP04424 464 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 GNSP15586 552 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 CSRP1P21291 193 aaKnown RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 ITPKAP23677 461 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 SLC6A4P31645 630 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 CCR1P32246 355 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 CLCN1P35523 988 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 COPAP53621 1224 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 SLC12A1Q13621 1099 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 TCP11X2Q5H9J9 407 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 ACBD5Q5T8D3 534 aaPredicted RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 KLHDC7AQ5VTJ3 777 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 SYPL2Q5VXT5 272 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 MBLAC2Q68D91 279 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 NADSYN1Q6IA69 706 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 DPY19L2P1Q6NXN4 242 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 KIAA1324Q6UXG2 1013 aaKnown RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 RBM43Q6ZSC3 357 aaKnown RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 C11orf57Q6ZUT1 292 aaPredicted RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 MFN1Q8IWA4 741 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 ATP6V0D2Q8N8Y2 350 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 ZNF397Q8NF99 534 aaPredicted RBP13.07□□□□□ -0.32
SNX6-207ENST00000556303 DNASE2BQ8WZ79 361 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 LMLNQ96KR4 655 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 CPXM1Q96SM3 734 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 ACP6Q9NPH0 428 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
SNX6-207ENST00000556303 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 GOLGA6L7A0A1B0GV03 622 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 KCNU1A8MYU2 1149 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 KCNJ18B7U540 433 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 MOCS3O95396 460 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 SYPP08247 313 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 ABCB4P21439 1286 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 PRKCHP24723 683 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 CDH5P33151 784 aaPredicted RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 SCNN1AP37088 669 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 TPMTP51580 245 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 SGSHP51688 502 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 OXCT1P55809 520 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 SFSWAPQ12872 951 aaKnown RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 CDH18Q13634 790 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 KCNJ12Q14500 433 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 PTPRNQ16849 979 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 FNDC3BQ53EP0 1204 aaKnown RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 SLC26A9Q7LBE3 791 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 SLC41A1Q8IVJ1 513 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 SORCS1Q8WY21 1168 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 TOE1Q96GM8 510 aaKnown RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 PPP1R9BQ96SB3 815 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 ZDHHC5Q9C0B5 715 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 NUCKS1Q9H1E3 243 aaKnown RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 PLCB1Q9NQ66 1216 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 KIAA1522Q9P206 1035 aaPredicted RBP13.06□□□□□ -0.32
SNX6-207ENST00000556303 SCML1Q9UN30 329 aa13.06□□□□□ -0.32
SNX6-207ENST00000556303 PATE3B3GLJ2 98 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 KCNK5O95279 499 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 TPM2P07951 284 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 SRPRAP08240 638 aaKnown RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 CEACAM1P13688 526 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 UCHL3P15374 230 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 TACR2P21452 398 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 CD70P32970 193 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 NOS2P35228 1153 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 ATXN3P54252 364 aaPredicted RBP13.05□□□□□ -0.32
SNX6-207ENST00000556303 ST8SIA6P61647 398 aa13.05□□□□□ -0.32
SNX6-207ENST00000556303 SLC6A3Q01959 620 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms