RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 ERCC4Q92889 916 aaPredicted RBP11.96□□□□□ -0.49
LRP1-209ENST00000555941 TTC17Q96AE7 1141 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 SERPINB11Q96P15 392 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 MIR1-1HGQ9H1L0 117 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 MAN1B1Q9UKM7 699 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 TLR6Q9Y2C9 796 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.49
LRP1-209ENST00000555941 CFAP47Q6ZTR5 3102 aa11.96□□□□□ -0.5
LRP1-209ENST00000555941 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 MED7O43513 233 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 TBL1XO60907 577 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 FGFR1OPO95684 399 aaKnown RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 DNTTP04053 509 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 HLA-EP13747 358 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 BRD2P25440 801 aaKnown RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 MATKP42679 507 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 KCNH2Q12809 1159 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 ARID5BQ14865 1188 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 TEAD4Q15561 434 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 TTC31Q49AM3 519 aaPredicted RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 FAM133BQ5BKY9 247 aaKnown RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 KLHL10Q6JEL2 608 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 USP30Q70CQ3 517 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 ENOSF1Q7L5Y1 443 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 CYB5D2Q8WUJ1 264 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 NELFBQ8WX92 580 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 ADAMTS14Q8WXS8 1223 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 FAM81BQ96LP2 452 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 BTBD1Q9H0C5 482 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 SGK2Q9HBY8 427 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 PRSS16Q9NQE7 514 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 EIF2B4Q9UI10 523 aaKnown RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
LRP1-209ENST00000555941 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 FAM208BQ5VWN6 2430 aa11.95□□□□□ -0.5
LRP1-209ENST00000555941 MUC22E2RYF6 1773 aaPredicted RBP11.95□□□□□ -0.5
LRP1-209ENST00000555941 RNASEH1O60930 286 aaKnown RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 CBFA2T3O75081 653 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 SEMA4FO95754 770 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 AFPP02771 609 aaKnown RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 FYNP06241 537 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 SLC6A4P31645 630 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 CD70P32970 193 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 ACSL1P33121 698 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 GPD2P43304 727 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 ST8SIA6P61647 398 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 RPS14P62263 151 aaKnown RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 FAM193AP78312 1265 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 MORC3Q14149 939 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 SUZ12Q15022 739 aaKnown RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 HLA-BQ31612 363 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 ZNF776Q68DI1 518 aaPredicted RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 ISM2Q6H9L7 571 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 RFWD3Q6PCD5 774 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 DBX2Q6ZNG2 339 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 FAM124AQ86V42 546 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 MFN1Q8IWA4 741 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 SCUBE3Q8IX30 993 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 DQX1Q8TE96 717 aaKnown RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 KAT5Q92993 513 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 SLC39A13Q96H72 371 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 LMLNQ96KR4 655 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 FCRL2Q96LA5 508 aaPredicted RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 MED15Q96RN5 788 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 CDC6Q99741 560 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 MIS12Q9H081 205 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 RSPH9Q9H1X1 276 aaPredicted RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 GAREM1Q9H706 876 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 TM7SF3Q9NS93 570 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 KIAA1522Q9P206 1035 aaPredicted RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 KLK13Q9UKR3 277 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 PCOLCE2Q9UKZ9 415 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 NCKAP1Q9Y2A7 1128 aa11.94□□□□□ -0.5
LRP1-209ENST00000555941 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.94□□□□□ -0.5
LRP1-209ENST00000555941 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
LRP1-209ENST00000555941 PIK3R2O00459 728 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 FLRT2O43155 660 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 DFNA5O60443 496 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 MOCS3O95396 460 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 SRPRAP08240 638 aaKnown RBP11.93□□□□□ -0.5
LRP1-209ENST00000555941 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 BMP6P22004 513 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 CD27P26842 260 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 GRIA4P48058 902 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 SGSHP51688 502 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 PAK1Q13153 545 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 HNRNPA1L2Q32P51 320 aaKnown RBP11.93□□□□□ -0.5
LRP1-209ENST00000555941 MS4A13Q5J8X5 152 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 NADSYN1Q6IA69 706 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 TMEM110Q86TL2 294 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 ARHGEF19Q8IW93 802 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 CHCHD4Q8N4Q1 142 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 CLEC4CQ8WTT0 213 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 ZCCHC14Q8WYQ9 949 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms