RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
ABCD4-223ENST00000555904 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
ABCD4-223ENST00000555904 GPATCH2LQ9NWQ4 482 aa12.93□□□□□ -0.34
ABCD4-223ENST00000555904 RCOR3Q9P2K3 495 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-223ENST00000555904 PCDHA3Q9Y5H8 950 aa12.93□□□□□ -0.34
ABCD4-223ENST00000555904 HELZP42694 1942 aaKnown RBP12.93□□□□□ -0.34
ABCD4-223ENST00000555904 DENND4CQ5VZ89 1909 aa12.93□□□□□ -0.34
ABCD4-223ENST00000555904 GOLGA6L7A0A1B0GV03 622 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 EEF2KO00418 725 aaKnown RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 FGF10O15520 208 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 TSPAN3O60637 253 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 EPHB2P29323 1055 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 SLC6A4P31645 630 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 GGCXP38435 758 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 PFKPQ01813 784 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 EML3Q32P44 896 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 TXNRD3NBQ6F5E7 133 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 FBXL22Q6P050 247 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 RFWD3Q6PCD5 774 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 TPGS1Q6ZTW0 290 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 CYP4V2Q6ZWL3 525 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 RCOR2Q8IZ40 523 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 PYROXD2Q8N2H3 581 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 SLC35F6Q8N357 371 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 ZNF557Q8N988 423 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 RSAD2Q8WXG1 361 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 CD101Q93033 1021 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 HES6Q96HZ4 224 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 ZFYVE19Q96K21 471 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 BBS2Q9BXC9 721 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 MAK16Q9BXY0 300 aaKnown RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 PLA2G2FQ9BZM2 168 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 ZYG11BQ9C0D3 744 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 CATSPERBQ9H7T0 1116 aa12.92□□□□□ -0.34
ABCD4-223ENST00000555904 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 PACSIN2Q9UNF0 486 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-223ENST00000555904 A0A1B0GVM2 712 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 CTAGE9A4FU28 777 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 TCAF2A6NFQ2 919 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 NEDD8-MDP1E9PL57 170 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 I6L893 689 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 KIF2AO00139 706 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 TRDMT1O14717 391 aaKnown RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 LRIG2O94898 1065 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 ASGR2P07307 311 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 ADH5P11766 374 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 MARCKSL1P49006 195 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 AMPD2Q01433 879 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 GAD2Q05329 585 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 TDGQ13569 410 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 CDH18Q13634 790 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 RUNX3Q13761 415 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 CA9Q16790 459 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 ITPRIPL2Q3MIP1 535 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 MPP7Q5T2T1 576 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 TRIM68Q6AZZ1 485 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 RFX8Q6ZV50 586 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 VSIG1Q86XK7 387 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 SLC44A3Q8N4M1 653 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 KRT35Q92764 455 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 BHMTQ93088 406 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 C16orf45Q96MC5 204 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 KCTD15Q96SI1 283 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 FAM83CQ9BQN1 747 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 RETREG1Q9H6L5 497 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 PCDH18Q9HCL0 1135 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 PPARGC1AQ9UBK2 798 aaKnown RBP12.91□□□□□ -0.34
ABCD4-223ENST00000555904 SNX10Q9Y5X0 201 aa12.91□□□□□ -0.34
ABCD4-223ENST00000555904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 PI4K2BG5E9Z4 385 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 FAM72CH0Y354 149 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 H0Y626 953 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 KCNK3O14649 394 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 TBL1XO60907 577 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 CLDN11O75508 207 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 TUBB4AP04350 444 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 CYP17A1P05093 508 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 SRFP11831 508 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 BMP1P13497 986 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ARSAP15289 507 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 GOT1P17174 413 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 KDELR1P24390 212 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 HCAR3P49019 387 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 CDH4P55283 916 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 COPS2P61201 443 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 TNK2Q07912 1038 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms