RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TRIM16O95361 564 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 GLI1P08151 1106 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 KRT5P13647 590 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 SLC6A4P31645 630 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 SGSHP51688 502 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 MTA1Q13330 715 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 FNDC3BQ53EP0 1204 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 NADSYN1Q6IA69 706 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 IL27RAQ6UWB1 636 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 MFN1Q8IWA4 741 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 FAM149B1Q96BN6 582 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 MIS12Q9H081 205 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 ST7Q9NRC1 585 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 SUN2Q9UH99 717 aa13.18□□□□□ -0.3
HNRNPC-221ENST00000555883 WDFY3Q8IZQ1 3526 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 PIK3R2O00459 728 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 LETM1O95202 739 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 PROS1P07225 676 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 CD59P13987 128 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 GNA15P30679 374 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 CD70P32970 193 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 YWHAZP63104 245 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 GRIK2Q13002 908 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 PDCLQ13371 301 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 MS4A13Q5J8X5 152 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 DCAF12L1Q5VU92 463 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 DENND1BQ6P3S1 775 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 GBP6Q6ZN66 633 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 CCDC117Q8IWD4 279 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 C1orf216Q8TAB5 229 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 WFDC5Q8TCV5 224 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 CYB5D2Q8WUJ1 264 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 SHC3Q92529 594 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 ERLEC1Q96DZ1 483 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 BTN2A3PQ96KV6 586 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 LHX5Q9H2C1 402 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 PRSS16Q9NQE7 514 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 FSCN3Q9NQT6 498 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 ASNSD1Q9NWL6 643 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 PCDHGC3Q9UN70 934 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
HNRNPC-221ENST00000555883 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 GOLGA6L7A0A1B0GV03 622 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 BECN2A8MW95 431 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 E5RJQ4 531 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 CAPN9O14815 690 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 BCAT2O15382 392 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 THAP12O43422 761 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 CALCAP01258 141 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 APOEP02649 317 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 DNTTP04053 509 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SRPRAP08240 638 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SLC2A3P11169 496 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 HLA-EP13747 358 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 ST8SIA6P61647 398 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 FOXC1Q12948 553 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 CDH18Q13634 790 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 HNRNPA1L2Q32P51 320 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 TTC39BQ5VTQ0 682 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SYPL2Q5VXT5 272 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 USP30Q70CQ3 517 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 TAC4Q86UU9 113 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 IRF2BP1Q8IU81 584 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 MYO19Q96H55 970 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 RSPH9Q9H1X1 276 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SGK2Q9HBY8 427 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 CYTH4Q9UIA0 394 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-221ENST00000555883 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 CACNA1EQ15878 2313 aa13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 FAM221BA6H8Z2 402 aa13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 LUC7L3O95232 432 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 MOCS3O95396 460 aa13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 CER1O95813 267 aa13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 MAOBP27338 520 aa13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 AFF3P51826 1226 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-221ENST00000555883 SNX16P57768 344 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms