RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 PCDHGA12O60330 932 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 TBL1XO60907 577 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 DKK1O94907 266 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 LCP1P13796 627 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 PTPRNQ16849 979 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 COL28A1Q2UY09 1125 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 USP30Q70CQ3 517 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 KIAA0907Q7Z7F0 614 aaPredicted RBP16.11■□□□□ 0.17
NEDD1-207ENST00000555114 MFN1Q8IWA4 741 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 UBA3Q8TBC4 463 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 IRGQQ8WZA9 623 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 EEF2KMTQ96G04 330 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 ACE2Q9BYF1 805 aaPredicted RBP16.11■□□□□ 0.17
NEDD1-207ENST00000555114 SCUBE2Q9NQ36 999 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 TOR4AQ9NXH8 423 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 COQ4Q9Y3A0 265 aa16.11■□□□□ 0.17
NEDD1-207ENST00000555114 ANKRD11Q6UB99 2663 aaPredicted RBP16.1■□□□□ 0.17
NEDD1-207ENST00000555114 MSI1O43347 362 aaKnown RBP16.1■□□□□ 0.17
NEDD1-207ENST00000555114 ZNF202O95125 648 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 ASLP04424 464 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 DAOAP59103 153 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 FKBP3Q00688 224 aaKnown RBP16.1■□□□□ 0.17
NEDD1-207ENST00000555114 STILQ15468 1287 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 CBWD6Q4V339 395 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 CBWD3Q5JTY5 395 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 CBWD5Q5RIA9 395 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 PIK3R6Q5UE93 754 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 KIAA0895LQ68EN5 471 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 MSANTD2Q6P1R3 559 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 HJURPQ8NCD3 748 aaPredicted RBP16.1■□□□□ 0.17
NEDD1-207ENST00000555114 FTSJ1Q9UET6 329 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 RAXQ9Y2V3 346 aa16.1■□□□□ 0.17
NEDD1-207ENST00000555114 EIF4E1BA6NMX2 242 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 E9PAM4 449 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 O00370 1275 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 ACSL4O60488 711 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 MOCS3O95396 460 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 PAEPP09466 180 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 TBX4P57082 545 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 RACK1P63244 317 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 RFWD3Q6PCD5 774 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 LCLAT1Q6UWP7 414 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 HNRNPLLQ8WVV9 542 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 AZIN2Q96A70 460 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 GTPBP4Q9BZE4 634 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 PABPC3Q9H361 631 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 FBXL12Q9NXK8 326 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 STIM2Q9P246 746 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 ARMCX3Q9UH62 379 aaPredicted RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
NEDD1-207ENST00000555114 BTBD3Q9Y2F9 522 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 WDFY3Q8IZQ1 3526 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 ADAMTS20P59510 1910 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 DMXL2Q8TDJ6 3036 aa16.09■□□□□ 0.17
NEDD1-207ENST00000555114 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 LRRC72A6NJI9 287 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 H0Y8X5 98 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 VILLO15195 856 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 PAPSS1O43252 624 aaPredicted RBP16.08■□□□□ 0.16
NEDD1-207ENST00000555114 FBXO21O94952 628 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 IGLV3-27P01718 113 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 LTFP02788 710 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 CD70P32970 193 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 CTSKP43235 329 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 SGSHP51688 502 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 CETN1Q12798 172 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 CDH18Q13634 790 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 CCDC157Q569K6 752 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 SMYD4Q8IYR2 804 aaPredicted RBP16.08■□□□□ 0.16
NEDD1-207ENST00000555114 KDM1BQ8NB78 822 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 FIBINQ8TAL6 211 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 TTC17Q96AE7 1141 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 SERPINB11Q96P15 392 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 SLCO1B1Q9Y6L6 691 aa16.08■□□□□ 0.16
NEDD1-207ENST00000555114 PLXNB3Q9ULL4 1909 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 ACACAQ13085 2346 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 A0A1W2PPC4 97 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 TRABD2BA6NFA1 517 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 M0QYV0 167 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 YKT6O15498 198 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 SART1O43290 800 aaKnown RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 CDK4P11802 303 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 RGS7P49802 495 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 LRRC63Q05C16 580 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 CYP4F3Q08477 520 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 LRMPQ12912 555 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 HNRNPA1L2Q32P51 320 aaKnown RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 PKDCCQ504Y2 493 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 SLC45A4Q5BKX6 768 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 FAM133BQ5BKY9 247 aaKnown RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 ZNF658Q5TYW1 1059 aaPredicted RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 RNF219Q5W0B1 726 aaPredicted RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 TMEM270Q6UE05 265 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 LAYNQ6UX15 382 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 NT5C1BQ96P26 610 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 OMDQ99983 421 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms