RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	SMG8	Q8ND04	991 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	BBOF1	Q8ND07	529 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	BCAS4	Q8TDM0	211 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	SMARCD2	Q92925	531 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZSWIM3	Q96MP5	696 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	TRIM51	Q9BSJ1	452 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	PI4K2A	Q9BTU6	479 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	TMEM109	Q9BVC6	243 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	TARS2	Q9BW92	718 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF518B	Q9C0D4	1074 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	EPN3	Q9H201	632 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	NEUROG2	Q9H2A3	272 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	PABPC3	Q9H361	631 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	WHRN	Q9P202	907 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	RSPH14	Q9UHP6	348 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	GGA2	Q9UJY4	613 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	INVS	Q9Y283	1065 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	HES2	Q9Y543	173 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	UNC79	Q9P2D8	2635 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	5e-8	■□□□□ 10.8
SRSF5-208	ENST00000554929	URB1	O60287	2271 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	IGKV6-21	A0A0C4DH24	114 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	MYBPHL	A2RUH7	354 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	HEPACAM2	A8MVW5	462 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	TULP2	O00295	520 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ARNTL	O00327	626 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF197	O14709	1029 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	THAP12	O43422	761 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	VNN1	O95497	513 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	GAS8	O95995	478 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	LRG1	P02750	347 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	CALB1	P05937	261 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ITIH2	P19823	946 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	CTH	P32929	405 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	NOP14	P78316	857 aa	Known RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	MCL1	Q07820	350 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ADCY2	Q08462	1091 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	CALCOCO2	Q13137	446 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	NCOA4	Q13772	614 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	BYSL	Q13895	437 aa	Known RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	CAPS	Q13938	189 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	MAPK6	Q16659	721 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	DUOXA2	Q1HG44	320 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF423	Q2M1K9	1284 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	SGO2	Q562F6	1265 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ODF2	Q5BJF6	829 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	PRSS36	Q5K4E3	855 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	C6orf118	Q5T5N4	469 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	KCTD16	Q68DU8	428 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	TRMT10C	Q7L0Y3	403 aa	Known RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	CYP2U1	Q7Z449	544 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	SRL	Q86TD4	932 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	RALGPS2	Q86X27	583 aa	Predicted RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ABCA7	Q8IZY2	2146 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF843	Q8N446	348 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	HHIP	Q96QV1	700 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	CCDC113	Q9H0I3	377 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	PARVA	Q9NVD7	372 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ADAM22	Q9P0K1	906 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	IP6K2	Q9UHH9	426 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	RRP15	Q9Y3B9	282 aa	Known RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	IPP	Q9Y573	584 aa		10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	ATXN2	Q99700	1313 aa	Known RBP	10.8	□□□□□ -0.68
SRSF5-208	ENST00000554929	THADA	Q6YHU6	1953 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	CACNA1E	Q15878	2313 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	ATXN7	O15265	892 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	IL18RAP	O95256	599 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	ASS1	P00966	412 aa	Known RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	RARA	P10276	462 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	RARG	P13631	454 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	HOXA11	P31270	313 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	LSP1	P33241	339 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	CCR2	P41597	374 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	MARCKSL1	P49006	195 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF132	P52740	706 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	PLTP	P55058	493 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	PPP2R2A	P63151	447 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	NOMO3	P69849	1222 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	POU5F1B	Q06416	359 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	LMAN2	Q12907	356 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	RAB33A	Q14088	237 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	PPP1R7	Q15435	360 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	SIX1	Q15475	284 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	KYAT1	Q16773	422 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	KRT71	Q3SY84	523 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	PLEKHA7	Q6IQ23	1121 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	PDZD4	Q76G19	769 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	ADAT2	Q7Z6V5	191 aa	Known RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	PIP4P1	Q86T03	277 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	KATNAL2	Q8IYT4	538 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	CAMKK1	Q8N5S9	505 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	UBR7	Q8N806	425 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	ATL2	Q8NHH9	583 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	EXD1	Q8NHP7	514 aa		10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF5-208	ENST00000554929	CCHCR1	Q8TD31	782 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms