RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ADAMTS1Q9UHI8 967 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 A0A087X0T9 212 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 SIGLEC16A6NMB1 481 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 WASH3PC4AMC7 463 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 CCP110O43303 1012 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 FTLP02792 175 aaPredicted RBP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 CYBBP04839 570 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 SERPING1P05155 500 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 FAM228BP0C875 321 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 KRT3P12035 628 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 GBP1P32455 592 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 CD70P32970 193 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 FNTBP49356 437 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 CCR3P51677 355 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 ADKP55263 362 aaKnown RBP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 SRSF5Q13243 272 aaKnown RBP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 AUHQ13825 339 aaKnown RBP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 DMC1Q14565 340 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 PPP2R5DQ14738 602 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 HEATR6Q6AI08 1181 aaKnown RBP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 FBXL22Q6P050 247 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 ARCQ7LC44 396 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 ZNF683Q8IZ20 524 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 ATP6V0D2Q8N8Y2 350 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 NELL1Q92832 810 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 MCEEQ96PE7 176 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 PRRX2Q99811 253 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 SELENOOQ9BVL4 669 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 TRIM5Q9C035 493 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 FBXO4Q9UKT5 387 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 STAP1Q9ULZ2 295 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 NENFQ9UMX5 172 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 SLC27A6Q9Y2P4 619 aa12.79□□□□□ -0.36
SYNE2-214ENST00000554928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYNE2-214ENST00000554928 VPS13AQ96RL7 3174 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 MFAP3LO75121 409 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 CNTN5O94779 1100 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ENDOD1O94919 500 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 PAPSS2O95340 614 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 TPM3P06753 285 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ABCB4P21439 1286 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 GPD1P21695 349 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 RDXP35241 583 aaKnown RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ZNF75DP51815 510 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 HDAC4P56524 1084 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 LMAN2Q12907 356 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 PLEKHA7Q6IQ23 1121 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ADIPOR2Q86V24 386 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 CCDC185Q8N715 623 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ZNF513Q8N8E2 541 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 HJURPQ8NCD3 748 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 OR52K2Q8NGK3 314 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 CENPIQ92674 756 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 DNAJC7Q99615 494 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 CHP1Q99653 195 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 IER2Q9BTL4 223 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 SIK2Q9H0K1 926 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 ISCUQ9H1K1 167 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 RRN3Q9NYV6 651 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 INTS6Q9UL03 887 aaKnown RBP12.78□□□□□ -0.36
SYNE2-214ENST00000554928 VANGL2Q9ULK5 521 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 RAD54BQ9Y620 910 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 MYO15AQ9UKN7 3530 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 DMDP11532 3685 aa12.78□□□□□ -0.36
SYNE2-214ENST00000554928 F5H5T6 163 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 RTN2O75298 545 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 GZMAP12544 262 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 SDC4P31431 198 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 PTPN9P43378 593 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
SYNE2-214ENST00000554928 GFPT1Q06210 699 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ARID5BQ14865 1188 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 FUT11Q495W5 492 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 SYT13Q7L8C5 426 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ANKS1BQ7Z6G8 1248 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-214ENST00000554928 MFN1Q8IWA4 741 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.77□□□□□ -0.37
SYNE2-214ENST00000554928 CYB5D2Q8WUJ1 264 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 EXOC4Q96A65 974 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ZNF653Q96CK0 615 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ARHGEF26Q96DR7 871 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 IQCDQ96DY2 449 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms