RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GOLPH3Q9H4A6 298 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 DHX35Q9H5Z1 703 aaKnown RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 ECT2Q9H8V3 914 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 RCOR3Q9P2K3 495 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 DUSP12Q9UNI6 340 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 DRGXA6NNA5 263 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 ZNF487B1APH4 448 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 PENKP01210 267 aaPredicted RBP16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 CYP17A1P05093 508 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 CTNNA2P26232 953 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 HCAR3P49019 387 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 AMPD2Q01433 879 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 GAD2Q05329 585 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 KCNT1Q5JUK3 1230 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 LY6G5CQ5SRR4 150 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 RNF43Q68DV7 783 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 FBXL22Q6P050 247 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 CPNE8Q86YQ8 564 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 RNF135Q8IUD6 432 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 LGI2Q8N0V4 545 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 CSGALNACT1Q8TDX6 532 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 MSANTD3Q96H12 275 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 ZFYVE19Q96K21 471 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 TMPRSS4Q9NRS4 437 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 DONSONQ9NYP3 566 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 PCDHA3Q9Y5H8 950 aa16.98■□□□□ 0.31
SPTLC2-203ENST00000554901 GOLGA6L7A0A1B0GV03 622 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 USP27XA6NNY8 438 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 E9PAM4 449 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 GLULP15104 373 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 ARSAP15289 507 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 HOXC13P31276 330 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 SMTNL2Q2TAL5 461 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 TRIM68Q6AZZ1 485 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 TXNRD3NBQ6F5E7 133 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 RFWD3Q6PCD5 774 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 TMEM25Q86YD3 366 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 UBALD2Q8IYN6 164 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 KATNAL2Q8IYT4 538 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 HSPH1Q92598 858 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 RPRD1AQ96P16 312 aaPredicted RBP16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 VANGL2Q9ULK5 521 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 HYOU1Q9Y4L1 999 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 UNC80Q8N2C7 3258 aa16.97■□□□□ 0.31
SPTLC2-203ENST00000554901 A0A1B0GVM2 712 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 TCAF2A6NFQ2 919 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 FGF10O15520 208 aaPredicted RBP16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 LRIG2O94898 1065 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 ADH5P11766 374 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 ARL4AP40617 200 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 ARSEP51690 589 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 CA9Q16790 459 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 FYB2Q5VWT5 728 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 C1orf228Q6PIY5 440 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 CHST9Q7L1S5 443 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 UBL4BQ8N7F7 174 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 KCTD6Q8NC69 237 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 DDI1Q8WTU0 396 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 TBC1D31Q96DN5 1066 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 HES6Q96HZ4 224 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 PRICKLE1Q96MT3 831 aaPredicted RBP16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 ZNF670Q9BS34 389 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 BBS2Q9BXC9 721 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 SLC2A11Q9BYW1 496 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 ZYG11BQ9C0D3 744 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 C8orf33Q9H7E9 229 aaPredicted RBP16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 GPATCH2LQ9NWQ4 482 aa16.96■□□□□ 0.31
SPTLC2-203ENST00000554901 FAM72CH0Y354 149 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 H3BRJ5 948 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 CACNG3O60359 315 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 CLDN11O75508 207 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 FTCDO95954 541 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 EIF2DP41214 584 aaKnown RBP16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 VCPP55072 806 aaKnown RBP16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 CDH4P55283 916 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 CDH6P55285 790 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 TNK2Q07912 1038 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 KRT81Q14533 505 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 ODF2Q5BJF6 829 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 ARTNQ5T4W7 220 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 FAM72AQ5TYM5 149 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 FAM72DQ6L9T8 149 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 TPGS1Q6ZTW0 290 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 C14orf80Q86SX3 495 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 FAM72BQ86X60 149 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 PYROXD2Q8N2H3 581 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 EXOC4Q96A65 974 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 XPO6Q96QU8 1125 aaKnown RBP16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 KCTD15Q96SI1 283 aaPredicted RBP16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 CATSPERBQ9H7T0 1116 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 PRDM16Q9HAZ2 1276 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 PCDH18Q9HCL0 1135 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 STIM2Q9P246 746 aa16.96■□□□□ 0.3
SPTLC2-203ENST00000554901 JRKLQ9Y4A0 524 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms