RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TMEM191BP0C7N4 346 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 HSPA8P11142 646 aaKnown RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 TSHRP16473 764 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 RCVRNP35243 200 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 STX3Q13277 289 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 DGKZQ13574 1117 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 PCGF5Q86SE9 256 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 CARM1Q86X55 608 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 LILRA2Q8N149 483 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 TFB1MQ8WVM0 346 aaKnown RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 ACSF2Q96CM8 615 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 ARHGAP26Q9UNA1 814 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 SLC8A2Q9UPR5 921 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF541Q9H0D2 1346 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 POLR2EP19388 210 aaKnown RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 CHRNA5P30532 468 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 PSMC1P62191 440 aaKnown RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF252P-AS1Q0IIN9 211 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 MSS51Q4VC12 460 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 SCARA3Q6AZY7 606 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 SPOCD1Q6ZMY3 1216 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 EEPD1Q7L9B9 569 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 ANKK1Q8NFD2 765 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF420Q8TAQ5 688 aaPredicted RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 KBTBD7Q8WVZ9 684 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 SLC44A1Q8WWI5 657 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 TMEM121Q9BTD3 319 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 SHCBP1LQ9BZQ2 653 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 CEP44Q9C0F1 390 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 C20orf27Q9GZN8 174 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 RPF2Q9H7B2 306 aaKnown RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 CLK4Q9HAZ1 481 aaKnown RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 IFT122Q9HBG6 1241 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 OLAHQ9NV23 265 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 ARHGAP28Q9P2N2 729 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 BCAP29Q9UHQ4 241 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 GIPC1O14908 333 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 TCEA1P23193 301 aaKnown RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 LIG4P49917 911 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 FNBP1LQ5T0N5 605 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 KRT80Q6KB66 452 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 FRMD7Q6ZUT3 714 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 CPNE9Q8IYJ1 553 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 PKP2Q99959 881 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 PSD2Q9BQI7 771 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 WDR83Q9BRX9 315 aaKnown RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 C10orf88Q9H8K7 445 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 SLC38A10Q9HBR0 1119 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 PCDH9Q9HC56 1237 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 CDC14AQ9UNH5 594 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
SYNE3-203ENST00000554873 AP4S1Q9Y587 144 aa16.06■□□□□ 0.16
SYNE3-203ENST00000554873 TMX2-CTNND1H3BSU7 103 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 J3QRK9 145 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 IFNB1P01574 187 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 GAD2Q05329 585 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 STYK1Q6J9G0 422 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SWSAP1Q6NVH7 229 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 LYSMD3Q7Z3D4 306 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 CYP2U1Q7Z449 544 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 C14orf80Q86SX3 495 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 FBXL8Q96CD0 374 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 OSBPL11Q9BXB4 747 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 HAPLN2Q9GZV7 340 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 XAB2Q9HCS7 855 aaKnown RBP16.05■□□□□ 0.16
SYNE3-203ENST00000554873 THAP1Q9NVV9 213 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 AGO2Q9UKV8 859 aaKnown RBP16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SLC30A1Q9Y6M5 507 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 E7ESA3 106 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 ASNSP08243 561 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 MMP8P22894 467 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 OGDHQ02218 1023 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■□□□ 14.1
SYNE3-203ENST00000554873 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SETD3Q86TU7 594 aaPredicted RBP16.05■□□□□ 0.16
SYNE3-203ENST00000554873 TERB1Q8NA31 727 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF606Q8WXB4 792 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 ZBTB45Q96K62 511 aaPredicted RBP16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SERPINI1Q99574 410 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 DOK1Q99704 481 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 APOL6Q9BWW8 343 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SIAEQ9HAT2 523 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 CNTN6Q9UQ52 1028 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
SYNE3-203ENST00000554873 MYH9P35579 1960 aaKnown RBP16.05■□□□□ 0.16
SYNE3-203ENST00000554873 A0A087WXM4 84 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 PRSS51A0A1B0GVH4 220 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 H3BMQ9 156 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 DGAT1O75907 488 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 MYL4P12829 197 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF26P17031 533 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 ENDOUP21128 410 aaKnown RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 HNRNPFP52597 415 aaKnown RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 ITGADQ13349 1161 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 E2F2Q14209 437 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms