RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TGFB3P10600 412 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 TKTP29401 623 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 MIPP30301 263 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 HNRNPH3P31942 346 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SERPINH1P50454 418 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 EN1Q05925 392 aaPredicted RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 PPIDQ08752 370 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SVOPQ8N4V2 548 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 ATG16L2Q8NAA4 619 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 KAT2BQ92831 832 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 C9orf16Q9BUW7 83 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 POLE3Q9NRF9 147 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 MFN2O95140 757 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 EGFRP00533 1210 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 PAX7P23759 505 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 NCKAP1LP55160 1127 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 NET1Q7Z628 596 aaPredicted RBP14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ART4Q93070 314 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ASB2Q96Q27 587 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 CDRT15Q96T59 188 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 SCAF8Q9UPN6 1271 aaKnown RBP14.25□□□□□ -0.13
VTI1B-204ENST00000554659 DCXO43602 365 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 IL5RAQ01344 420 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 PPATQ06203 517 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 BFSP2Q13515 415 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 NT5DC4Q86YG4 428 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 AGAP11Q8TF27 550 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 RNFT2Q96EX2 444 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 VAT1Q99536 393 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 CEP44Q9C0F1 390 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 CAPN10Q9HC96 672 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 AGLP35573 1532 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ASNA1O43681 348 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 MSLNQ13421 630 aaPredicted RBP14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ALFQ53S48 1182 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 MARC1Q5VT66 337 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ILDR2Q71H61 639 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 C10orf53Q8N6V4 93 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 BAP1Q92560 729 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ELOVL6Q9H5J4 265 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 NOL6Q9H6R4 1146 aaKnown RBP14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ZFYVE28Q9HCC9 887 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 GTF2A1LQ9UNN4 478 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 C15orf38-AP3S2A0A0A6YYH1 394 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ERI2A8K979 691 aaKnown RBP14.25□□□□□ -0.13
VTI1B-204ENST00000554659 TMEM114B3SHH9 223 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 SNPHO15079 494 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 TBC1D12O60347 775 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 HMGCRP04035 888 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 THP07101 528 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 KDELR1P24390 212 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 YWHAZP63104 245 aaKnown RBP14.25□□□□□ -0.13
VTI1B-204ENST00000554659 SLC6A3Q01959 620 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 C11orf88Q6PI97 169 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 FOXR2Q6PJQ5 311 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 VN1R5Q7Z5H4 357 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 ARPINQ7Z6K5 226 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 LZTR1Q8N653 840 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 PHF21BQ96EK2 531 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
VTI1B-204ENST00000554659 FAM25AB3EWG3 89 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 FAM25CB3EWG5 89 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 FAM25GB3EWG6 89 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 EML1O00423 815 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 PROCP04070 461 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 RPLP2P05387 115 aaKnown RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 MYBL2P10244 700 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 CCR1P32246 355 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 CCNG1P51959 295 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 TMEM26Q6ZUK4 368 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 C1orf186Q6ZWK4 172 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 EID3Q8N140 333 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 BTBD7Q9P203 1132 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 MGAT4DA6NG13 374 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 HOXB8P17481 243 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 DRD4P21917 467 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 FLT3P36888 993 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KPNA1P52294 538 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 AMPD2Q01433 879 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 FBXO16Q8IX29 292 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 EMILIN2Q9BXX0 1053 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 PRRG3Q9BZD7 231 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 PXDNQ92626 1479 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 A0A087WXM4 84 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KPNA4O00629 521 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 INPP4BO15327 924 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KRT6AP02538 564 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KRT6BP04259 564 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 AMPD1P23109 780 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KRT6CP48668 564 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 ARL4DP49703 201 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 ZNF135P52742 658 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 ATP12AP54707 1039 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 DUPD1Q68J44 220 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 ZCCHC23Q6ZST2 131 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 FBXO39Q8N4B4 442 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms