RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CCDC110Q8TBZ0 833 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 HTRA1Q92743 480 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZUFSPQ96AP4 578 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 INTS12Q96CB8 462 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CASD1Q96PB1 797 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 FAM193BQ96PV7 902 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CDK5RAP1Q96SZ6 601 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TTC1Q99614 292 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 RUSC1Q9BVN2 902 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM117Q9H0C3 514 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 VPS16Q9H269 839 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 IL25Q9H293 177 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ADNPQ9H2P0 1102 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ADAM7Q9H2U9 754 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TLR9Q9NR96 1032 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LMBRD1Q9NUN5 540 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SETD4Q9NVD3 440 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 EVA1BQ9NVM1 165 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TBCCD1Q9NVR7 557 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TUBE1Q9UJT0 475 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SORCS3Q9UPU3 1222 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM5Q9Y2B1 443 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CAB39Q9Y376 341 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZDHHC9Q9Y397 364 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA2Q9Y5H1 932 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CHD7Q9P2D1 2997 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 UNC80Q8N2C7 3258 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MYO9BQ13459 2157 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LRRIQ4A6NIV6 560 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TTC34A8MYJ7 566 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 B4E1Z4 1266 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 H0YAE9 185 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 H3BQ06 376 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 M0R2N6 131 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MEIS1O00470 390 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NOP56O00567 594 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LINC01565O15544 149 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PRPSAP2O60256 369 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA12O60330 932 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 HBP1O60381 514 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GPR32O75388 356 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 OFD1O75665 1012 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CFBP00751 764 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GLAP06280 429 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SLFN14P0C7P3 912 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8HP0CJ92 632 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC192P0DO97 292 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ITGB5P18084 799 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SFPQP23246 707 aaKnown RBP eCLIP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 RPL13P26373 211 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CIITAP33076 1130 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MAGEA9P43362 315 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CPA2P48052 419 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DHPSP49366 369 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MRPS15P82914 257 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 KDSRQ06136 332 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GRIK3Q13003 919 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ERV3-1Q14264 604 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCSK7Q16549 785 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF528Q3MIS6 628 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PM20D1Q6GTS8 502 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM53Q6P2H8 277 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 C16orf46Q6P387 395 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 IYDQ6PHW0 289 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ABHD15Q6UXT9 468 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ARHGAP36Q6ZRI8 547 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SLC24A5Q71RS6 500 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 RAB11FIP2Q7L804 512 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ADGRD2Q7Z7M1 963 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GPR149Q86SP6 731 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SGMS1Q86VZ5 419 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM50Q86XT4 487 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC105Q8IYK2 499 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SLC39A11Q8N1S5 342 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GOLM1Q8NBJ4 401 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ARMC2Q8NEN0 867 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TOR1AIP2Q8NFQ8 470 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 RDM1Q8NG50 284 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 OR6P1Q8NGX9 317 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PIBF1Q8WXW3 757 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 HSPH1Q92598 858 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GPKOWQ92917 476 aaPredicted RBP eCLIP2.82□□□□□ -1.963e-6■■■■□ 23.6
PRPF39-206ENST00000554429 USP7Q93009 1102 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ARL5BQ96KC2 179 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MXRA8Q9BRK3 442 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 UBAC1Q9BSL1 405 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 EDEM2Q9BV94 578 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 STMN4Q9H169 189 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 OR10A4Q9H209 315 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 AGO3Q9H9G7 860 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LY9Q9HBG7 655 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PPP1R14DQ9NXH3 145 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NSMCE4AQ9NXX6 385 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ACTR3BQ9P1U1 418 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LRFN1Q9P244 771 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DNAJB9Q9UBS3 223 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CHORDC1Q9UHD1 332 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DPP7Q9UHL4 492 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ARHGAP26Q9UNA1 814 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SNX6Q9UNH7 406 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms