RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 WBP2Q969T9 261 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 EPAS1Q99814 870 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 C7orf25Q9BPX7 421 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DDX23Q9BUQ8 820 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SDCBP2Q9H190 292 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 NUCKS1Q9H1E3 243 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 CUEDC2Q9H467 287 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DPEP2Q9H4A9 486 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 VRTNQ9H8Y1 702 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM8AQ9HCN3 771 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ATP13A1Q9HD20 1204 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 C11orf16Q9NQ32 467 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 OLFML3Q9NRN5 406 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 CALCOCO1Q9P1Z2 691 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 WNT16Q9UBV4 365 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DNAJC16Q9Y2G8 782 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 RALGAPA1Q6GYQ0 2036 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PKDREJQ9NTG1 2253 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 TTC24A2A3L6 582 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 A8MU76 341 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PIRO00625 290 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 IKBKBO14920 756 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MED7O43513 233 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SPOPO43791 374 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 HYAL3O43820 417 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SNAP91O60641 907 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MICAL2O94851 1124 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ZIC2O95409 532 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 TRUB2O95900 331 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ITGAVP06756 1048 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SP9P0CG40 484 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 BCKDHBP21953 392 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MPSTP25325 297 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 HOXC8P31273 242 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MAN1A1P33908 653 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PLA2G5P39877 138 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PLA2G4AP47712 749 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 BCAT1P54687 386 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 NRLP54845 237 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PITX1P78337 314 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ORC2Q13416 577 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 KRT33BQ14525 404 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MESDQ14696 234 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PSMD6Q15008 389 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PCSK7Q16549 785 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 GEN1Q17RS7 908 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SKIDA1Q1XH10 827 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 C15orf59Q2T9L4 293 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ZSCAN23Q3MJ62 389 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 LYSMD4Q5XG99 296 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PMF1Q6P1K2 205 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DENND1BQ6P3S1 775 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DNAJC24Q6P3W2 148 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 LILRA6Q6PI73 481 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 RHBDF2Q6PJF5 856 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DHRS13Q6UX07 377 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 VSTM1Q6UX27 236 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 USP53Q70EK8 1073 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 DDX42Q86XP3 938 aaKnown RBP eCLIP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 HID1Q8IV36 788 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SLC9A9Q8IVB4 645 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 GUF1Q8N442 669 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 FBXL16Q8N461 479 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 LINC01465Q8N7H1 131 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 Q8N9G6 341 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM35BQ8NCS4 154 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF397Q8NF99 534 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MDGA1Q8NFP4 955 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 OR7D4Q8NG98 312 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 PLEKHO2Q8TD55 490 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ACDQ96AP0 544 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 RMDN1Q96DB5 314 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 C18orf8Q96DM3 657 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SERAC1Q96JX3 654 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MAGEB10Q96LZ2 347 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 CFAP57Q96MR6 1250 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 GSDMAQ96QA5 445 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 LGMNQ99538 433 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SMOQ99835 787 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 NTPCRQ9BSD7 190 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MAK16Q9BXY0 300 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 BTBD1Q9H0C5 482 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 CCDC113Q9H0I3 377 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 TKTL2Q9H0I9 626 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 NDST4Q9H3R1 872 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SEMA4AQ9H3S1 761 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 GAREM1Q9H706 876 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 CAAP1Q9H8G2 361 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 RC3H2Q9HBD1 1191 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 APOBEC3GQ9HC16 384 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 SPHK2Q9NRA0 654 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 METTL5Q9NRN9 209 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 GEMIN8Q9NWZ8 242 aaKnown RBP2.6□□□□□ -1.99
PRPF39-205ENST00000554081 IFNKQ9P0W0 207 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D14Q9P2M4 693 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ADAMTS1Q9UHI8 967 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 ASB3Q9Y575 518 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 BACE2Q9Y5Z0 518 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MGAQ8IWI9 3026 aa2.6□□□□□ -1.99
PRPF39-205ENST00000554081 MED13LQ71F56 2210 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms