RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CCDC180Q9P1Z9 1646 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 A0A0G2JK05 382 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 J3KTA2 159 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 PODXLO00592 558 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 HNRNPDLO14979 420 aaKnown RBP4.54□□□□□ -1.68
SCFD1-210ENST00000553693 SPTLC2O15270 562 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 PPM1GO15355 546 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-210ENST00000553693 DHHO43323 396 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 GLP2RO95838 553 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 TNFSF4P23510 183 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 POLD2P49005 469 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 PGM5Q15124 567 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 C6orf10Q5SRN2 563 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 HIBCHQ6NVY1 386 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-210ENST00000553693 C16orf89Q6UX73 402 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 ARL14EPQ8N8R7 260 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-210ENST00000553693 OR52N4Q8NGI2 321 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 NPIPB3Q92617 1050 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 LPAR1Q92633 364 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 ZNF566Q969W8 418 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 GPR78Q96P69 363 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 PAAF1Q9BRP4 392 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 WDR83Q9BRX9 315 aaKnown RBP4.54□□□□□ -1.68
SCFD1-210ENST00000553693 TASP1Q9H6P5 420 aa4.54□□□□□ -1.68
SCFD1-210ENST00000553693 PNMA6EA0A0J9YXQ4 647 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 LACTBL1A8MY62 500 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 RASA4BC9J798 803 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 M0QZQ0 153 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 APAF1O14727 1248 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 RASA4O43374 803 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 PPP6R2O75170 966 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 FGF18O76093 207 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 ITGA5P08648 1049 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 RFPL3SP0C7P2 107 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 TGM2P21980 687 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 EEF1GP26641 437 aaKnown RBP4.53□□□□□ -1.68
SCFD1-210ENST00000553693 PPATQ06203 517 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 SMTNL2Q2TAL5 461 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 FAM209BQ5JX69 171 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 PIK3CD-AS1Q5SR53 167 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 WDR93Q6P2C0 686 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 PJA1Q8NG27 643 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 MSI2Q96DH6 328 aaKnown RBP4.53□□□□□ -1.68
SCFD1-210ENST00000553693 CCDC136Q96JN2 1154 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 TMEM204Q9BSN7 226 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 PCGF6Q9BYE7 350 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 TM7SF3Q9NS93 570 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 UTS2RQ9UKP6 389 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 B3GNT3Q9Y2A9 372 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 DTNAQ9Y4J8 743 aa4.53□□□□□ -1.68
SCFD1-210ENST00000553693 ANO9A1A5B4 782 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 RHODO00212 210 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 ATG13O75143 517 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 CNTN5O94779 1100 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 ALDOAP04075 364 aaKnown RBP4.52□□□□□ -1.69
SCFD1-210ENST00000553693 CIITAP33076 1130 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 TM4SF4P48230 202 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 SLC37A1P57057 533 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 GAD2Q05329 585 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 SLC39A5Q6ZMH5 540 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 OR2C3Q8N628 320 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 SLC22A17Q8WUG5 538 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 NAA15Q9BXJ9 866 aaKnown RBP4.52□□□□□ -1.69
SCFD1-210ENST00000553693 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
SCFD1-210ENST00000553693 AAMDCQ9H7C9 122 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 FSCN3Q9NQT6 498 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 CHPF2Q9P2E5 772 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 LRP12Q9Y561 859 aa4.52□□□□□ -1.69
SCFD1-210ENST00000553693 A0A1W2PPC1 479 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 C3orf70A6NLC5 250 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-210ENST00000553693 NKX2-8O15522 239 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 NCK2O43639 380 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 PARNO95453 639 aaKnown RBP4.51□□□□□ -1.69
SCFD1-210ENST00000553693 P2RX3P56373 397 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 TLE3Q04726 772 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 LONRF1Q17RB8 773 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 TTC39AQ5SRH9 613 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 IZUMO3Q5VZ72 239 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 PDXDC1Q6P996 788 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 TMEM88Q6PEY1 159 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 CYB5R4Q7L1T6 521 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 ADHFE1Q8IWW8 467 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 EME1Q96AY2 570 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 RIPOR3Q96MK2 946 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 SFXN1Q9H9B4 322 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 LAMP3Q9UQV4 416 aa4.51□□□□□ -1.69
SCFD1-210ENST00000553693 A6NNC1 897 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 PCDH17O14917 1159 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 TAF5LO75529 589 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 NTSR2O95665 410 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 MYL3P08590 195 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 NBPF7P0C2Y1 421 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-210ENST00000553693 TGFB3P10600 412 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 HOXB2P14652 356 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 AAK1Q2M2I8 961 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 KIAA1755Q5JYT7 1200 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 UBAP2Q5T6F2 1119 aaKnown RBP4.5□□□□□ -1.69
SCFD1-210ENST00000553693 CCDC181Q5TID7 509 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms