RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ACTRT2Q8TDY3 377 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 GTF2H4Q92759 462 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 OTULINQ96BN8 352 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ISOC1Q96CN7 298 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NUSAP1Q9BXS6 441 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ATP8A2Q9NTI2 1148 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 MBP02144 154 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ERVK-21P61565 698 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 PSMC6P62333 389 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 UBAP2LQ14157 1087 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CYP2R1Q6VVX0 501 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 KBTBD3Q8NAB2 608 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 GFM1Q96RP9 751 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 GAL3ST1Q99999 423 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 GTSE1Q9NYZ3 720 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF879B4DU55 563 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 BTN3A1O00481 513 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 FOXP2O15409 715 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 TXNL1O43396 289 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NTRK1P04629 796 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CHAF1BQ13112 559 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 PEX6Q13608 980 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 DPYSQ14117 519 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 FGL2Q14314 439 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 RNF151Q2KHN1 245 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 KLHL26Q53HC5 615 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 PAN3Q58A45 887 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ANKRD40Q6AI12 368 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 TAF8Q7Z7C8 310 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 P3H2Q8IVL5 708 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 BHLHE22Q8NFJ8 381 aaPredicted RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 JADE3Q92613 823 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM163AQ96GL9 167 aaPredicted RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NAT9Q9BTE0 207 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 C1QTNF1Q9BXJ1 281 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 UCK2Q9BZX2 261 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 MTMR4Q9NYA4 1195 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ERAP1Q9NZ08 941 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 RIMS2Q9UQ26 1411 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 FPGTO14772 594 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 LYPLA2O95372 231 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 GUCA1CO95843 209 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ETV5P41161 510 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 OR3A3P47888 321 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CCNG1P51959 295 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NR1H3Q13133 447 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 TBRG1Q3YBR2 411 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CDONQ4KMG0 1287 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM83BQ5T0W9 1011 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CACHD1Q5VU97 1274 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 DPY19L3Q6ZPD9 716 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 DNAJB8Q8NHS0 232 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 HEXDCQ8WVB3 486 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NXNL1Q96CM4 212 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF112Q9UJU3 913 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 STARD13Q9Y3M8 1113 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 TBX22Q9Y458 520 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 SCAF11Q99590 1463 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NUP160Q12769 1436 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ALX3O95076 343 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 DNAJB2P25686 324 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 MMP13P45452 471 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ITGA8P53708 1063 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC18A2Q05940 514 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 TCIRG1Q13488 830 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SMCO1Q147U7 214 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 AFTPHQ6ULP2 937 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 COMMD7Q86VX2 200 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CIR1Q86X95 450 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PDSS2Q86YH6 399 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RFX6Q8HWS3 928 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 MAPKAPK5Q8IW41 473 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF597Q96LX8 424 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RTCBQ9Y3I0 505 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM237BA0A1B0GVD1 139 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 WDR64B1ANS9 1081 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CREB1P16220 341 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 XRCC1P18887 633 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 TFE3P19532 575 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CALML3P27482 149 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NR2C2P49116 596 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CHADLQ6NUI6 762 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CRTC3Q6UUV7 619 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ARCQ7LC44 396 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 FBXW8Q8N3Y1 598 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CAMKK1Q8N5S9 505 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SGK3Q96BR1 496 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 TRIM62Q9BVG3 475 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ASPSCR1Q9BZE9 553 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 KLC2Q9H0B6 622 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NEUROG2Q9H2A3 272 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 C12orf65Q9H3J6 166 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CDC42EP4Q9H3Q1 356 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 UBE2TQ9NPD8 197 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 BAG5Q9UL15 447 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms