RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 REXO1L1PQ8IX06 675 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 PYROXD2Q8N2H3 581 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 CPA6Q8N4T0 437 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 TTC8Q8TAM2 541 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 FAM71BQ8TC56 605 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 RNF34Q969K3 372 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 GPATCH2LQ9NWQ4 482 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 PCSK1NQ9UHG2 260 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 PYCARDQ9ULZ3 195 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 SPECC1L-ADORA2AF8WAN1 911 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 DCXO43602 365 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 BUB1O43683 1085 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 TSPAN3O60637 253 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 RNF8O76064 485 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 ADH1CP00326 375 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 PTMAP06454 111 aaKnown RBP15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 CISD3P0C7P0 127 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 RARAP10276 462 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 GLULP15104 373 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 KIF5AQ12840 1032 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 TPGS1Q6ZTW0 290 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 CHSY1Q86X52 802 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 PSTKQ8IV42 348 aaKnown RBP15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 LGI2Q8N0V4 545 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 WFDC5Q8TCV5 224 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 TEKT4Q8WW24 435 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 TSC1Q92574 1164 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 EDAQ92838 391 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 COL25A1Q9BXS0 654 aaPredicted RBP15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 FBRSL1Q9HCM7 1045 aaKnown RBP15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 ARHGEF3Q9NR81 526 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 OR12D3Q9UGF7 316 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 SLC12A6Q9UHW9 1150 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 VANGL2Q9ULK5 521 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 HYOU1Q9Y4L1 999 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 ALG6Q9Y672 507 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 CAPN6Q9Y6Q1 641 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 PIAS3Q9Y6X2 628 aa15.34■□□□□ 0.05
MTHFD1-204ENST00000553405 MIA3Q5JRA6 1907 aa15.33■□□□□ 0.05
MTHFD1-204ENST00000553405 E9PAM4 449 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 TRIM24O15164 1050 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 PRPSAP2O60256 369 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 CNTN5O94779 1100 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 LRIG2O94898 1065 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 TYRP14679 529 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 COMTP21964 271 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 L1CAMP32004 1257 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 SLC6A11P48066 632 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 STARD6P59095 220 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 GAD2Q05329 585 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 MLF2Q15773 248 aaPredicted RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 DPYSL2Q16555 572 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 ARL13BQ3SXY8 428 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 MPPE1Q53F39 396 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 BOLA3Q53S33 107 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 ALFQ53S48 1182 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 KCNT1Q5JUK3 1230 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 ACBD5Q5T8D3 534 aaPredicted RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 POLNQ7Z5Q5 900 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 RALGPS2Q86X27 583 aaPredicted RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 HJURPQ8NCD3 748 aaPredicted RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 TMA16Q96EY4 203 aaKnown RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 CALR3Q96L12 384 aaKnown RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 DDX50Q9BQ39 737 aaKnown RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 BBS2Q9BXC9 721 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 SIK2Q9H0K1 926 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 C8orf33Q9H7E9 229 aaPredicted RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 PLK2Q9NYY3 685 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 PPARGC1AQ9UBK2 798 aaKnown RBP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 AP4E1Q9UPM8 1137 aa15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.33■□□□□ 0.04
MTHFD1-204ENST00000553405 MACROD2A1Z1Q3 448 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 TMEM110-MUSTN1A8MSY1 372 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 NEDD8-MDP1E9PL57 170 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 F5H5T6 163 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 TULP3O75386 442 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 MOCS3O95396 460 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 IL4RP24394 825 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 EIF2DP41214 584 aaKnown RBP15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 SLC1A1P43005 524 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 NOP2P46087 812 aaKnown RBP15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 SIGLEC14Q08ET2 396 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 FZD5Q13467 585 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 SMTNL2Q2TAL5 461 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 EFHC2Q5JST6 749 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 CXorf57Q6NSI4 855 aaKnown RBP15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 KIAA0907Q7Z7F0 614 aaPredicted RBP15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 NLRP14Q86W24 1093 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 CIR1Q86X95 450 aaPredicted RBP15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 CFAP52Q8N1V2 620 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 RNF10Q8N5U6 811 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms