RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 PMF1Q6P1K2 205 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 MSANTD2Q6P1R3 559 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 RFWD3Q6PCD5 774 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 UNC45BQ8IWX7 931 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 IRGQQ8WZA9 623 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 TFAP2BQ92481 460 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 SNX19Q92543 992 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 GOLGA1Q92805 767 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 SLC35C1Q96A29 364 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 AZIN2Q96A70 460 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 BIRC7Q96CA5 298 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 GSDMAQ96QA5 445 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 CCDC86Q9H6F5 360 aaKnown RBP9.76□□□□□ -0.85
CHD8-203ENST00000553283 SGK2Q9HBY8 427 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 TM9SF3Q9HD45 589 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 ANKRD6Q9Y2G4 727 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 SNX11Q9Y5W9 270 aa9.76□□□□□ -0.85
CHD8-203ENST00000553283 ITPR1Q14643 2758 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 PMM2O15305 246 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 ACSL4O60488 711 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 TBL1XO60907 577 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 DKK1O94907 266 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 FSBPO95073 299 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 CD27P26842 260 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 SLC6A4P31645 630 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 GRIA4P48058 902 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 RGS7P49802 495 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 TBX4P57082 545 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 LRRC63Q05C16 580 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 TTC31Q49AM3 519 aaPredicted RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 FAM133BQ5BKY9 247 aaKnown RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 NUGGCQ68CJ6 796 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 ZNF776Q68DI1 518 aaPredicted RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 TMEM270Q6UE05 265 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 FMR1NBQ8N0W7 255 aaPredicted RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 ZNF557Q8N988 423 aaPredicted RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 FIBINQ8TAL6 211 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 WFDC5Q8TCV5 224 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 IGSF8Q969P0 613 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 TTC17Q96AE7 1141 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 LMLNQ96KR4 655 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 HSFY1Q96LI6 401 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 ZSWIM1Q9BR11 485 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 GTPBP4Q9BZE4 634 aaKnown RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 RSPH9Q9H1X1 276 aaPredicted RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 GDPD2Q9HCC8 539 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 METTL14Q9HCE5 456 aaKnown RBP9.75□□□□□ -0.85
CHD8-203ENST00000553283 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD8-203ENST00000553283 NCKAP1Q9Y2A7 1128 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 BTBD3Q9Y2F9 522 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 GPSM3Q9Y4H4 160 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 CKAP5Q14008 2032 aa9.75□□□□□ -0.85
CHD8-203ENST00000553283 NUMA1Q14980 2115 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 RNF225M0QZC1 329 aaPredicted RBP9.74□□□□□ -0.85
CHD8-203ENST00000553283 PIK3R2O00459 728 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 KCNK3O14649 394 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 TNFSF14O43557 240 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 PCDHGA12O60330 932 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 FBXO21O94952 628 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 SMC2O95347 1197 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 LTFP02788 710 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 CTSKP43235 329 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 FMO5P49326 533 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 ST8SIA6P61647 398 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 SFSWAPQ12872 951 aaKnown RBP9.74□□□□□ -0.85
CHD8-203ENST00000553283 ARID5BQ14865 1188 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 STILQ15468 1287 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 HNRNPA1L2Q32P51 320 aaKnown RBP9.74□□□□□ -0.85
CHD8-203ENST00000553283 KCNT1Q5JUK3 1230 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 KIAA0895LQ68EN5 471 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 NADSYN1Q6IA69 706 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 USP30Q70CQ3 517 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 MFN1Q8IWA4 741 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 KDM1BQ8NB78 822 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 HJURPQ8NCD3 748 aaPredicted RBP9.74□□□□□ -0.85
CHD8-203ENST00000553283 SPATA20Q8TB22 786 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 MYO19Q96H55 970 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 NT5C1BQ96P26 610 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 DDX50Q9BQ39 737 aaKnown RBP9.74□□□□□ -0.85
CHD8-203ENST00000553283 ORAI3Q9BRQ5 295 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 PABPC3Q9H361 631 aaKnown RBP9.74□□□□□ -0.85
CHD8-203ENST00000553283 MTG2Q9H4K7 406 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 STIM2Q9P246 746 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 SCML1Q9UN30 329 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 PCDHB4Q9Y5E5 795 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 KNTC1P50748 2209 aa9.74□□□□□ -0.85
CHD8-203ENST00000553283 GOLGA4Q13439 2230 aaKnown RBP9.73□□□□□ -0.85
CHD8-203ENST00000553283 TRIM49BA6NDI0 452 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 GOLGA8CPA6NN73 597 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 H0Y8X5 98 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 M0QYV0 167 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 VILLO15195 856 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 DFNA5O60443 496 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 RNASEH1O60930 286 aaKnown RBP9.73□□□□□ -0.85
CHD8-203ENST00000553283 SIN3BO75182 1162 aa9.73□□□□□ -0.85
CHD8-203ENST00000553283 ASLP04424 464 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms