RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 RAPGEF1Q13905 1077 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 MS4A13Q5J8X5 152 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 DAB2IPQ5VWQ8 1189 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 OR6B2Q6IFH4 312 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 RBM43Q6ZSC3 357 aaKnown RBP16.48■□□□□ 0.23
CDK4-215ENST00000553237 RGL4Q8IZJ4 473 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 LGI2Q8N0V4 545 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 DEFB106AQ8N104 65 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
CDK4-215ENST00000553237 TOE1Q96GM8 510 aaKnown RBP16.48■□□□□ 0.23
CDK4-215ENST00000553237 LHX5Q9H2C1 402 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 COX16Q9P0S2 106 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 PCDHGC3Q9UN70 934 aa16.48■□□□□ 0.23
CDK4-215ENST00000553237 PLXND1Q9Y4D7 1925 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 TYW5A2RUC4 315 aaKnown RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 ERBB2P04626 1255 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 ATP5BP06576 529 aaKnown RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 DLDP09622 509 aaKnown RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 ACADMP11310 421 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 ENGP17813 658 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 MAOBP27338 520 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 DPP6P42658 865 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 TPMTP51580 245 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 CDK17Q00537 523 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 LMAN2Q12907 356 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 DRAP1Q14919 205 aaPredicted RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 PTPRNQ16849 979 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 DUOXA1Q1HG43 343 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 N4BP2L1Q5TBK1 243 aaPredicted RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 RAP1GAP2Q684P5 730 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 SLC23A3Q6PIS1 610 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 MMS22LQ6ZRQ5 1243 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 FAM183BPQ6ZVS7 135 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 METTL3Q86U44 580 aaKnown RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 CHSY1Q86X52 802 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 FAM71AQ8IYT1 594 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 FIBINQ8TAL6 211 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 ZNF419Q96HQ0 510 aaPredicted RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 LMLNQ96KR4 655 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 GPR174Q9BXC1 333 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 IRX2Q9BZI1 471 aaPredicted RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 TMEM245Q9H330 911 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 FAM204AQ9H8W3 233 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 TAB2Q9NYJ8 693 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 WSB2Q9NYS7 404 aaPredicted RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 USP36Q9P275 1121 aaKnown RBP16.47■□□□□ 0.23
CDK4-215ENST00000553237 NFE2L3Q9Y4A8 694 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 FHOD1Q9Y613 1164 aa16.47■□□□□ 0.23
CDK4-215ENST00000553237 KCNK5O95279 499 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 IGLV3-25P01717 112 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 TACR2P21452 398 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 CAMK2GQ13555 558 aaPredicted RBP16.46■□□□□ 0.23
CDK4-215ENST00000553237 CDH18Q13634 790 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 FSCBQ5H9T9 825 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
CDK4-215ENST00000553237 EFHC1Q5JVL4 640 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 KLHDC7AQ5VTJ3 777 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 PEAR1Q5VY43 1037 aaPredicted RBP16.46■□□□□ 0.23
CDK4-215ENST00000553237 PSAPL1Q6NUJ1 521 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
CDK4-215ENST00000553237 FAM124AQ86V42 546 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 CCDC117Q8IWD4 279 aaPredicted RBP16.46■□□□□ 0.23
CDK4-215ENST00000553237 OR2T3Q8NH03 318 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 CEP76Q8TAP6 659 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 RNF34Q969K3 372 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 BTN2A3PQ96KV6 586 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 NOX5Q96PH1 765 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 GTPBP2Q9BX10 602 aaKnown RBP16.46■□□□□ 0.23
CDK4-215ENST00000553237 PDCL3Q9H2J4 239 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 MTG2Q9H4K7 406 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 DDIT4Q9NX09 232 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 SLC6A14Q9UN76 642 aa16.46■□□□□ 0.23
CDK4-215ENST00000553237 TNRC6BQ9UPQ9 1833 aaKnown RBP16.45■□□□□ 0.22
CDK4-215ENST00000553237 H0Y626 953 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 GIPC1O14908 333 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 GLI1P08151 1106 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 SERPINF2P08697 491 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 HOXD12P35452 270 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 CSKP41240 450 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 NUMBP49757 651 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 NOVA1P51513 510 aaKnown RBP16.45■□□□□ 0.22
CDK4-215ENST00000553237 BPIFB4P59827 614 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 GFPT1Q06210 699 aaPredicted RBP16.45■□□□□ 0.22
CDK4-215ENST00000553237 PTPN20Q4JDL3 420 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 SYCP2LQ5T4T6 812 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 TAF3Q5VWG9 929 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 SASS6Q6UVJ0 657 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 OLFML1Q6UWY5 402 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 ZNF557Q8N988 423 aaPredicted RBP16.45■□□□□ 0.22
CDK4-215ENST00000553237 ENOX1Q8TC92 643 aaKnown RBP16.45■□□□□ 0.22
CDK4-215ENST00000553237 FOXJ1Q92949 421 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 SLC2A13Q96QE2 648 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 VPS16Q9H269 839 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDK4-215ENST00000553237 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 SLC12A6Q9UHW9 1150 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms