RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 NUGGCQ68CJ6 796 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 TTI2Q6NXR4 508 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 MMS22LQ6ZRQ5 1243 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 SLCO6A1Q86UG4 719 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 CFAP52Q8N1V2 620 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 SCML4Q8N228 414 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 DQX1Q8TE96 717 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 GANCQ8TET4 914 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 FAM149B1Q96BN6 582 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 FCRL2Q96LA5 508 aaPredicted RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 HSFY1Q96LI6 401 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 PRICKLE1Q96MT3 831 aaPredicted RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 KREMEN1Q96MU8 473 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 TIGD1Q96MW7 591 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 BTBD1Q9H0C5 482 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 SUN2Q9UH99 717 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 XPO7Q9UIA9 1087 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 PCOLCE2Q9UKZ9 415 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 SNX11Q9Y5W9 270 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 GON4LQ3T8J9 2241 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 MYH10P35580 1976 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 KMT2BQ9UMN6 2715 aaPredicted RBP11.91□□□□□ -0.5
NEK3-204ENST00000552973 PCDH15Q96QU1 1955 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 TAF4O00268 1085 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 CBFA2T3O75081 653 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 SEMA4FO95754 770 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 CER1O95813 267 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 KRT5P13647 590 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 BMP6P22004 513 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 CSKP41240 450 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 SCAPQ12770 1279 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 STILQ15468 1287 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 FSCBQ5H9T9 825 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 SYPL2Q5VXT5 272 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 DHX40Q8IX18 779 aaKnown RBP11.91□□□□□ -0.5
NEK3-204ENST00000552973 RHBDD1Q8TEB9 315 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 ADAMTS14Q8WXS8 1223 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 BIRC7Q96CA5 298 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 LMLNQ96KR4 655 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 TM9SF3Q9HD45 589 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 ACP6Q9NPH0 428 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 INTS6Q9UL03 887 aaKnown RBP11.91□□□□□ -0.5
NEK3-204ENST00000552973 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.91□□□□□ -0.5
NEK3-204ENST00000552973 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
NEK3-204ENST00000552973 ADAMTS9Q9P2N4 1935 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 ASCC3Q8N3C0 2202 aaKnown RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 FAM221BA6H8Z2 402 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 PMM2O15305 246 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 P4HA2O15460 535 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 SIN3BO75182 1162 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 FBXO21O94952 628 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 GPD2P43304 727 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 AFF3P51826 1226 aaKnown RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 ST8SIA6P61647 398 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 NUCB2P80303 420 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 IL9RQ01113 521 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 RING1Q06587 406 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 DCAF6Q58WW2 860 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 MS4A13Q5J8X5 152 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 KCNT1Q5JUK3 1230 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 PRAMEF14Q5SWL7 426 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 MPP7Q5T2T1 576 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 ZNF776Q68DI1 518 aaPredicted RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 IL27RAQ6UWB1 636 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 TAC4Q86UU9 113 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 MARCH9Q86YJ5 346 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 HJURPQ8NCD3 748 aaPredicted RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 FIBINQ8TAL6 211 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 TTC17Q96AE7 1141 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 MYO19Q96H55 970 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 SERPINB11Q96P15 392 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 SRRTQ9BXP5 876 aaKnown RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 INTS2Q9H0H0 1204 aaKnown RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 UBE2TQ9NPD8 197 aaPredicted RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 APOBEC2Q9Y235 224 aaKnown RBP11.9□□□□□ -0.5
NEK3-204ENST00000552973 BTBD3Q9Y2F9 522 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 ANKRD6Q9Y2G4 727 aa11.9□□□□□ -0.5
NEK3-204ENST00000552973 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.51
NEK3-204ENST00000552973 A0A1W2PP55 124 aa11.89□□□□□ -0.51
NEK3-204ENST00000552973 BICDL2A1A5D9 508 aa11.89□□□□□ -0.51
NEK3-204ENST00000552973 TYW5A2RUC4 315 aaKnown RBP11.89□□□□□ -0.51
NEK3-204ENST00000552973 TTC34A8MYJ7 566 aa11.89□□□□□ -0.51
NEK3-204ENST00000552973 CAPN9O14815 690 aa11.89□□□□□ -0.51
NEK3-204ENST00000552973 IRAK2O43187 625 aa11.89□□□□□ -0.51
NEK3-204ENST00000552973 GADD45BO75293 160 aaPredicted RBP11.89□□□□□ -0.51
NEK3-204ENST00000552973 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
NEK3-204ENST00000552973 AFPP02771 609 aaKnown RBP11.89□□□□□ -0.51
NEK3-204ENST00000552973 ATXN1LP0C7T5 689 aaKnown RBP11.89□□□□□ -0.51
NEK3-204ENST00000552973 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms