RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 IL17RCQ8NAC3 791 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 TXNDC5Q8NBS9 432 aaKnown RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CTNNBL1Q8WYA6 563 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 OVCA2Q8WZ82 227 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CPXM1Q96SM3 734 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CDK5RAP1Q96SZ6 601 aaKnown RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 SELENOOQ9BVL4 669 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 FSCN3Q9NQT6 498 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 TMEM30AQ9NV96 361 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 MYO1AQ9UBC5 1043 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 SCML2Q9UQR0 700 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 SCINQ9Y6U3 715 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 PCDH15Q96QU1 1955 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 AKAP13Q12802 2813 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 A0A1W2PQH9 124 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 FAM221BA6H8Z2 402 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 SOWAHDA6NJG2 315 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 UPK3BL1B0FP48 263 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 UPK3BL2E5RIL1 263 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 SGK1O00141 431 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 DDX3XO00571 662 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM116-218ENST00000552839 ALDH1A2O94788 518 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 ERBB2P04626 1255 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 CYP17A1P05093 508 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 MYBL1P10243 752 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 GZMAP12544 262 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 ITPKAP23677 461 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 CDH5P33151 784 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-218ENST00000552839 TIE1P35590 1138 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 YWHAGP61981 247 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM116-218ENST00000552839 USP46P62068 366 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
TMEM116-218ENST00000552839 SLC18A3Q16572 532 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 EFHC1Q5JVL4 640 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 C10orf120Q5SQS8 335 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 HECTD3Q5T447 861 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 EMC10Q5UCC4 262 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 FAM183BPQ6ZVS7 135 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 PROSER1Q86XN7 944 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 IRGQQ8WZA9 623 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 SPACA7Q96KW9 195 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 PCDHB18PQ96TA0 734 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 CHP1Q99653 195 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 SLC4A5Q9BY07 1137 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 PKD1L2Q7Z442 2459 aa11.85□□□□□ -0.51
TMEM116-218ENST00000552839 A0A087X0T9 212 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 HHLA1C9JL84 531 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 HSF2BPO75031 334 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 KLF8O95600 359 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 LTFP02788 710 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 FTLP02792 175 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 CFIP05156 583 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 FAM228BP0C875 321 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 MMP8P22894 467 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 KIR2DL1P43626 348 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 SLC6A11P48066 632 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 DAOAP59103 153 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 RNASE9P60153 205 aaKnown RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 SLC6A3Q01959 620 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 MAP7D1Q3KQU3 841 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 C2CD6Q53TS8 623 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 RAB41Q5JT25 222 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 SPDYCQ5MJ68 293 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 PEAR1Q5VY43 1037 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 LYSMD4Q5XG99 296 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 PHLDB2Q86SQ0 1253 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 TMEM110Q86TL2 294 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 C12orf40Q86WS4 652 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 SCUBE3Q8IX30 993 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 ADGRG2Q8IZP9 1017 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 HMGB4Q8WW32 186 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 FAM204AQ9H8W3 233 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 MRPL47Q9HD33 250 aaKnown RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 POLMQ9NP87 494 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 ZDHHC4Q9NPG8 344 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 ABCC13Q9NSE7 274 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 OLA1Q9NTK5 396 aaKnown RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 BCCIPQ9P287 314 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 CNOT8Q9UFF9 292 aaKnown RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 CHORDC1Q9UHD1 332 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-218ENST00000552839 CYTH4Q9UIA0 394 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 RASAL2Q9UJF2 1139 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 STAP1Q9ULZ2 295 aa11.84□□□□□ -0.51
TMEM116-218ENST00000552839 PTPRBP23467 1997 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 H0Y626 953 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 LEFTY2O00292 366 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 ARHGAP6O43182 974 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 TLR5O60602 858 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms