RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 HDDC3Q8N4P3 179 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 ZNF276Q8N554 614 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 ZNF513Q8N8E2 541 aaPredicted RBP7.19□□□□□ -1.26
CBX5-204ENST00000550411 NAT16Q8N8M0 369 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 TPCN2Q8NHX9 752 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 CEP76Q8TAP6 659 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 CLEC4CQ8WTT0 213 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 SLC35F5Q8WV83 523 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 ZCCHC14Q8WYQ9 949 aaKnown RBP7.19□□□□□ -1.26
CBX5-204ENST00000550411 GTPBP2Q9BX10 602 aaKnown RBP7.19□□□□□ -1.26
CBX5-204ENST00000550411 UBXN6Q9BZV1 441 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 HSD3B7Q9H2F3 369 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 THAP9Q9H5L6 903 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 TLR8Q9NR97 1041 aaKnown RBP7.19□□□□□ -1.26
CBX5-204ENST00000550411 SAMSN1Q9NSI8 373 aaKnown RBP7.19□□□□□ -1.26
CBX5-204ENST00000550411 CLIC5Q9NZA1 410 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 SLC6A14Q9UN76 642 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 MSRB2Q9Y3D2 182 aa7.19□□□□□ -1.26
CBX5-204ENST00000550411 GCN1Q92616 2671 aaKnown RBP7.19□□□□□ -1.26
CBX5-204ENST00000550411 UNC13CQ8NB66 2214 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 SPAARA0A1B0GVQ0 90 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 UPK3BL1B0FP48 263 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 UPK3BL2E5RIL1 263 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 M0QYV0 167 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 PIK3R2O00459 728 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 ICMTO60725 284 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 OPHN1O60890 802 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 ZBED1O96006 694 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 FYNP06241 537 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 SERPINF2P08697 491 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 HOXB2P14652 356 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 GABRG2P18507 467 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 RDXP35241 583 aaKnown RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 HOXD12P35452 270 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 WASP42768 502 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 COPS2P61201 443 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 YWHAGP61981 247 aaKnown RBP eCLIP7.18□□□□□ -1.26
CBX5-204ENST00000550411 SIM1P81133 766 aaPredicted RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 GFPT1Q06210 699 aaPredicted RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 ZNF33AQ06730 810 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 KCNMA1Q12791 1236 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 EFEMP1Q12805 493 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 COL9A2Q14055 689 aaPredicted RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 CNGA2Q16280 664 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 MAN2A1Q16706 1144 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 ANO4Q32M45 955 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 C10orf120Q5SQS8 335 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 MSANTD2Q6P1R3 559 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 HTR3DQ70Z44 454 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 APTXQ7Z2E3 356 aaKnown RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 RABEPKQ7Z6M1 372 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 PIP4P1Q86T03 277 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 TMEM25Q86YD3 366 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 MIB1Q86YT6 1006 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 SCML4Q8N228 414 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 DEFB119Q8N690 84 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 TERB1Q8NA31 727 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 KCTD13Q8WZ19 329 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 PIWIL1Q96J94 861 aaKnown RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 GBP4Q96PP9 640 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 UBE2TQ9NPD8 197 aaPredicted RBP7.18□□□□□ -1.26
CBX5-204ENST00000550411 FSCN3Q9NQT6 498 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 SPHK2Q9NRA0 654 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 MARK1Q9P0L2 795 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 TMEM63CQ9P1W3 806 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 DEC1Q9P2X7 70 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 APEX2Q9UBZ4 518 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 TJP2Q9UDY2 1190 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 DNMT3LQ9UJW3 386 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 STARD13Q9Y3M8 1113 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 SCN8AQ9UQD0 1980 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 PTPRQQ9UMZ3 2332 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 LAMA5O15230 3695 aa7.18□□□□□ -1.26
CBX5-204ENST00000550411 ARHGEF17Q96PE2 2063 aaPredicted RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 IGHV1OR15-9A0A0B4J2B8 117 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 H0Y626 953 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 EPHB6O15197 1021 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 ZBTB24O43167 697 aaPredicted RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 MSI1O43347 362 aaKnown RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 CACNG3O60359 315 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 ZNF217O75362 1048 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 TRIM16O95361 564 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 FGFR1OPO95684 399 aaKnown RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 ADH1BP00325 375 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 IGLV3-27P01718 113 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 SYPP08247 313 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 KRT5P13647 590 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 TRIM21P19474 475 aaKnown RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 NTSR1P30989 418 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 ATP5C1P36542 298 aaKnown RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 GPD2P43304 727 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 MTIF2P46199 727 aaKnown RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 HNRNPDQ14103 355 aaKnown RBP7.17□□□□□ -1.26
CBX5-204ENST00000550411 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 NCAPHQ15003 741 aa7.17□□□□□ -1.26
CBX5-204ENST00000550411 KRT31Q15323 416 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms