RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	ARID3B	Q8IVW6	561 aa	Predicted RBP	12	□□□□□ -0.49
CNOT2-223	ENST00000550160	NPAS3	Q8IXF0	933 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	CELF5	Q8N6W0	485 aa	Known RBP	12	□□□□□ -0.49
CNOT2-223	ENST00000550160	ITFG1	Q8TB96	612 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12	□□□□□ -0.49
CNOT2-223	ENST00000550160	SH3RF2	Q8TEC5	729 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	TSC1	Q92574	1164 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	FGF13	Q92913	245 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	FAF2	Q96CS3	445 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	MS4A14	Q96JA4	679 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	RPRD1A	Q96P16	312 aa	Predicted RBP	12	□□□□□ -0.49
CNOT2-223	ENST00000550160	RNF157	Q96PX1	679 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	HEMGN	Q9BXL5	484 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12	□□□□□ -0.49
CNOT2-223	ENST00000550160	S1PR5	Q9H228	398 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	ANLN	Q9NQW6	1124 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	MTMR10	Q9NXD2	777 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	CWC15	Q9P013	229 aa	Known RBP	12	□□□□□ -0.49
CNOT2-223	ENST00000550160	TBC1D14	Q9P2M4	693 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	CD207	Q9UJ71	328 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	CDH7	Q9ULB5	785 aa		12	□□□□□ -0.49
CNOT2-223	ENST00000550160	CCDC188	H7C350	402 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160		I6L893	689 aa	Predicted RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	APOC4-APOC2	K7ER74	178 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	SLC9A3R1	O14745	358 aa	Predicted RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	APOC2	P02655	101 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	TCF3	P15923	654 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	DYNLT1	P63172	113 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	MMRN1	Q13201	1228 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	AUH	Q13825	339 aa	Known RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	PIK3R6	Q5UE93	754 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	RAP1GAP2	Q684P5	730 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	BZW1	Q7L1Q6	419 aa	Known RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	KIAA1958	Q8N8K9	716 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	SMRP1	Q8NCR6	262 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	MYLIP	Q8WY64	445 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	P3H4	Q92791	437 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	SMARCD2	Q92925	531 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	USP13	Q92995	863 aa	Predicted RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	E2F7	Q96AV8	911 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	OTUB2	Q96DC9	234 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	MSLNL	Q96KJ4	702 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	CDX2	Q99626	313 aa	Predicted RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	RETREG1	Q9H6L5	497 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	ARHGEF4	Q9NR80	690 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	XPO7	Q9UIA9	1087 aa	Known RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	STOML2	Q9UJZ1	356 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	AGO1	Q9UL18	857 aa	Known RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	OBSL1	O75147	1896 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	ANAPC1	Q9H1A4	1944 aa		11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.99	□□□□□ -0.49
CNOT2-223	ENST00000550160	FAM72C	H0Y354	149 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	ZNF189	O75820	626 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	PRAMEF12	O95522	483 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	CYBB	P04839	570 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	HOXC13	P31276	330 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	GBP2	P32456	591 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	GGCX	P38435	758 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	TUBB4B	P68371	445 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	DLX2	Q07687	328 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	USP4	Q13107	963 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	KLF1	Q13351	362 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	DPYS	Q14117	519 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	CBX2	Q14781	532 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	LLGL1	Q15334	1064 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	FAM72A	Q5TYM5	149 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	MANEAL	Q5VSG8	457 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	SLC9A4	Q6AI14	798 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	FAM72D	Q6L9T8	149 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	CCDC70	Q6NSX1	233 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160		Q6ZNB5	142 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	ADAT2	Q7Z6V5	191 aa	Known RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	FAM72B	Q86X60	149 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	LGI2	Q8N0V4	545 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	LZTR1	Q8N653	840 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	DEFB123	Q8N688	67 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	SPATA4	Q8NEY3	305 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	PCDH19	Q8TAB3	1148 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	ADAMTS19	Q8TE59	1207 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	RUNDC3B	Q96NL0	473 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	CARD6	Q9BX69	1037 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	AP1M1	Q9BXS5	423 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	ZYG11B	Q9C0D3	744 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	SMG9	Q9H0W8	520 aa	Known RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	THG1L	Q9NWX6	298 aa	Known RBP	11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	OBP2A	Q9NY56	170 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	SMARCAL1	Q9NZC9	954 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	VANGL2	Q9ULK5	521 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	SNX10	Q9Y5X0	201 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	RAD54B	Q9Y620	910 aa		11.98	□□□□□ -0.49
CNOT2-223	ENST00000550160	IGLV3-10	A0A075B6K4	115 aa		11.97	□□□□□ -0.49
CNOT2-223	ENST00000550160	PDE2A	O00408	941 aa	Predicted RBP	11.97	□□□□□ -0.49
CNOT2-223	ENST00000550160	NRG2	O14511	850 aa	Predicted RBP	11.97	□□□□□ -0.49
CNOT2-223	ENST00000550160	MCF2L	O15068	1137 aa		11.97	□□□□□ -0.49
CNOT2-223	ENST00000550160	NCAM2	O15394	837 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms