RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PROS1P07225 676 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 DLDP09622 509 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 ACADMP11310 421 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 KRT5P13647 590 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 FAM193AP78312 1265 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 SIM1P81133 766 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 TAC4Q86UU9 113 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 MFN1Q8IWA4 741 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 SLC39A13Q96H72 371 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 SCNM1Q9BWG6 230 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 SRRTQ9BXP5 876 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 CYTH4Q9UIA0 394 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 NAALADL1Q9UQQ1 740 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 TLR6Q9Y2C9 796 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 ASPMQ8IZT6 3477 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 SART1O43290 800 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 SLC14A1Q13336 389 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 BEND5Q7L4P6 421 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 FAM124AQ86V42 546 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 SCUBE3Q8IX30 993 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 C1orf216Q8TAB5 229 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 ADAM32Q8TC27 787 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 GATA6Q92908 595 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 FAM149B1Q96BN6 582 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 MYO19Q96H55 970 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 SLC4A5Q9BY07 1137 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 ZDHHC5Q9C0B5 715 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 NUCKS1Q9H1E3 243 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 MIR1-1HGQ9H1L0 117 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 PCED1AQ9H1Q7 454 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 FBRSQ9HAH7 460 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 ACP6Q9NPH0 428 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 PRSS16Q9NQE7 514 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 ST7Q9NRC1 585 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 PLA2G4CQ9UP65 541 aa18.06■□□□□ 0.48
CHMP1A-205ENST00000548650 CFAP47Q6ZTR5 3102 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 E5RJQ4 531 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 PAPSS1O43252 624 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 HYAL3O43820 417 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 ATP5BP06576 529 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 ACADSBP45954 432 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 RPS14P62263 151 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 RPS24P62847 133 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 BNC1Q01954 994 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 SYPL2Q5VXT5 272 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 TRIM65Q6PJ69 517 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 ZNF557Q8N988 423 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 STK32AQ8WU08 396 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 MED15Q96RN5 788 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 UBE2TQ9NPD8 197 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 STIM2Q9P246 746 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 XPO7Q9UIA9 1087 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 INTS6Q9UL03 887 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 SLCO1B1Q9Y6L6 691 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 KNL1Q8NG31 2342 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 PLXNA2O75051 1894 aa18.05■□□□□ 0.48
CHMP1A-205ENST00000548650 BECN2A8MW95 431 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 LETM1O95202 739 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 IGLV3-25P01717 112 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 POLR2EP19388 210 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 GNA15P30679 374 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 ACSL1P33121 698 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 ZBTB16Q05516 673 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 PDCLQ13371 301 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 MS4A13Q5J8X5 152 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 GJB7Q6PEY0 223 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 NAXDQ8IW45 347 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 FIBINQ8TAL6 211 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 ZNF606Q8WXB4 792 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 TTC17Q96AE7 1141 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 CAMK1GQ96NX5 476 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 DDX50Q9BQ39 737 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 TRIM62Q9BVG3 475 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 C6orf106Q9H6K1 298 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 EIF2B4Q9UI10 523 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 RWDD2AQ9UIY3 292 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 NEUROG3Q9Y4Z2 214 aa18.04■□□□□ 0.48
CHMP1A-205ENST00000548650 TYW5A2RUC4 315 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 BCAT2O15382 392 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 THAP12O43422 761 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 MED7O43513 233 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 SH3BP5O60239 455 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 MOCS2O96007 188 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 CSKP41240 450 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 PITX1P78337 314 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 APBA1Q02410 837 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 CDH18Q13634 790 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 HNRNPDQ14103 355 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 FSCBQ5H9T9 825 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 ENOSF1Q7L5Y1 443 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 TMEM110Q86TL2 294 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 MRGPRX3Q96LB0 322 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 CRACR2AQ9BSW2 395 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 MTG2Q9H4K7 406 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 IL21RQ9HBE5 538 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 KIAA1468Q9P260 1216 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 TJP2Q9UDY2 1190 aa18.03■□□□□ 0.48
CHMP1A-205ENST00000548650 KLK13Q9UKR3 277 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms