RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 HRO43593 1189 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 PAGE1O75459 146 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ADCY5O95622 1261 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 KRT3P12035 628 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 NTSR1P30989 418 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 WASP42768 502 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ATXN1P54253 815 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ZBED6P86452 979 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 MTA1Q13330 715 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 BRMS1LQ5PSV4 323 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ITIH6Q6UXX5 1313 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ASCL5Q7RTU5 278 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 MFN1Q8IWA4 741 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 CHPFQ8IZ52 775 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 MCOLN2Q8IZK6 566 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 C3orf20Q8ND61 904 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 RXFP2Q8WXD0 754 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 SYN2Q92777 582 aaPredicted RBP19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 SELENOOQ9BVL4 669 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 TKTL2Q9H0I9 626 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ANLNQ9NQW6 1124 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ABCB8Q9NUT2 735 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ELOVL2Q9NXB9 296 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 ARHGEF38Q9NXL2 777 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 EBF1Q9UH73 591 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 TCRBV5S1A1TA0A578 114 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 PRR23AA6NEV1 266 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 C2CD4BA6NLJ0 364 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 TMCO5BA8MYB1 307 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 I6L893 689 aaPredicted RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 DDX3XO00571 662 aaKnown RBP eCLIP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 LMNAP02545 664 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 GYPCP04921 128 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 PABPC1P11940 636 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 PDGFRAP16234 1089 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 RFC1P35251 1148 aaPredicted RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 ATP11AP98196 1134 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 SRSF5Q13243 272 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 AUHQ13825 339 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 EIF4HQ15056 248 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 CCDC14Q49A88 953 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 KIAA0907Q7Z7F0 614 aaPredicted RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 CARNMT1Q8N4J0 409 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 SUMF1Q8NBK3 374 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 FIBINQ8TAL6 211 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 UCMAQ8WVF2 138 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 SORCS1Q8WY21 1168 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 CIPCQ9C0C6 399 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 TMEM51Q9NW97 253 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 CACNA2D2Q9NY47 1150 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 GGA2Q9UJY4 613 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 LUC7L2Q9Y383 392 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 PAXBP1Q9Y5B6 917 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 HS3ST4Q9Y661 456 aa19.37■□□□□ 0.69
PRPF40B-206ENST00000547764 SIGLEC16A6NMB1 481 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 WASH3PC4AMC7 463 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 AXIN1O15169 862 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 TIMM44O43615 452 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 GFRA3O60609 400 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 ENDOD1O94919 500 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 HOXB2P14652 356 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 SDC4P31431 198 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 CD70P32970 193 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 CNR2P34972 360 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 RDXP35241 583 aaKnown RBP19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 GGCXP38435 758 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 C15orf59Q2T9L4 293 aaPredicted RBP19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 SH3PXD2AQ5TCZ1 1133 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 HGSNATQ68CP4 663 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 SDE2Q6IQ49 451 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 ANO7Q6IWH7 933 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 PPP1R2P3Q6NXS1 205 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 FBXL22Q6P050 247 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 CHST9Q7L1S5 443 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 ADIPOR2Q86V24 386 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 RASSF3Q86WH2 238 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 ZNF557Q8N988 423 aaPredicted RBP19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 WFIKKN2Q8TEU8 576 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 IGSF8Q969P0 613 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 VCPIP1Q96JH7 1222 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 LMLNQ96KR4 655 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 GABRG3Q99928 467 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 SIK2Q9H0K1 926 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 POLMQ9NP87 494 aaPredicted RBP19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 TMPRSS4Q9NRS4 437 aa19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 THAP10Q9P2Z0 257 aaPredicted RBP19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRPF40B-206ENST00000547764 USP34Q70CQ2 3546 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 LUC7L3O95232 432 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 GZMAP12544 262 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 RRM1P23921 792 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 HOXD11P31277 338 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 CASP14P31944 242 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 PTPN9P43378 593 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 LMAN2Q12907 356 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 CDH18Q13634 790 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 CDO1Q16878 200 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 RAB6CQ53S08 254 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms