RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 HAPLN3Q96S86 360 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 KCTD15Q96SI1 283 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-217ENST00000545738 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.84■□□□□ 0.29
LIMS2-217ENST00000545738 AP4E1Q9UPM8 1137 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 WDFY4Q6ZS81 3184 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 PRPSAP2O60256 369 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 TECTAO75443 2155 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 PALMO75781 387 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 CNTN5O94779 1100 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 PENKP01210 267 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-217ENST00000545738 CD48P09326 243 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 HOXD9P28356 352 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-217ENST00000545738 GJA4P35212 333 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 GJC1P36383 396 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 ALFQ53S48 1182 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 ANKS1BQ7Z6G8 1248 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 DAAM2Q86T65 1068 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 SFTPA1Q8IWL2 248 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 LGI2Q8N0V4 545 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 KRT35Q92764 455 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 OR12D3Q9UGF7 316 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 ZNF510Q9Y2H8 683 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 NEDD8-MDP1E9PL57 170 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-217ENST00000545738 LRIG2O94898 1065 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 SLC34A2O95436 690 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 ARSEP51690 589 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 NAP1L1P55209 391 aaKnown RBP16.83■□□□□ 0.28
LIMS2-217ENST00000545738 ERMARDQ5T6L9 678 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 RNF43Q68DV7 783 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 ASTLQ6HA08 431 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-217ENST00000545738 ETFBKMTQ8IXQ9 262 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 NAT16Q8N8M0 369 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 OR52K2Q8NGK3 314 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 C1orf74Q96LT6 269 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 OSBPL2Q9H1P3 480 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 FBRSL1Q9HCM7 1045 aaKnown RBP16.83■□□□□ 0.28
LIMS2-217ENST00000545738 TRPV5Q9NQA5 729 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 MPP6Q9NZW5 540 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 MARK1Q9P0L2 795 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 ZNF212Q9UDV6 495 aa16.83■□□□□ 0.28
LIMS2-217ENST00000545738 PACSIN2Q9UNF0 486 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-217ENST00000545738 IGLV3-10A0A075B6K4 115 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 KRBA1A5PL33 1030 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 E9PAM4 449 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 KRT86O43790 486 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 NFATC1O95644 943 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 FTCDO95954 541 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 ADH5P11766 374 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 TYRP14679 529 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 L1CAMP32004 1257 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 CHKAP35790 457 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 OPRD1P41143 372 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 SSR1P43307 286 aaKnown RBP16.82■□□□□ 0.28
LIMS2-217ENST00000545738 SLC6A11P48066 632 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 ANO4Q32M45 955 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 ITPRIPL2Q3MIP1 535 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 C5orf22Q49AR2 442 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 NT5DC3Q86UY8 548 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 HSPH1Q92598 858 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 TSGA10Q9BZW7 698 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 DHX35Q9H5Z1 703 aaKnown RBP16.82■□□□□ 0.28
LIMS2-217ENST00000545738 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
LIMS2-217ENST00000545738 NDFIP2Q9NV92 336 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 USP34Q70CQ2 3546 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 HOXC11O43248 304 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-217ENST00000545738 SRGAP2O75044 1071 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 TNNT1P13805 278 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 CD72P21854 359 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 IL4RP24394 825 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 NUMBP49757 651 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 DPYSL2Q16555 572 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 ARL13BQ3SXY8 428 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 EFHC2Q5JST6 749 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 CCAR2Q8N163 923 aaKnown RBP16.82■□□□□ 0.28
LIMS2-217ENST00000545738 RAPGEF5Q92565 580 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 DNASE1L2Q92874 299 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 RPRD1AQ96P16 312 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-217ENST00000545738 SLC12A6Q9UHW9 1150 aa16.82■□□□□ 0.28
LIMS2-217ENST00000545738 F5H5T6 163 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 SPOPO43791 374 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 TBL1XO60907 577 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 GOT1P17174 413 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 CTHP32929 405 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 AIF1P55008 147 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 NRG1Q02297 640 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-217ENST00000545738 MMRN1Q13201 1228 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 FSCBQ5H9T9 825 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 PHTF2Q8N3S3 785 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 RNF10Q8N5U6 811 aaKnown RBP16.81■□□□□ 0.28
LIMS2-217ENST00000545738 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 EZH1Q92800 747 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-217ENST00000545738 TMA16Q96EY4 203 aaKnown RBP16.81■□□□□ 0.28
LIMS2-217ENST00000545738 STIM2Q9P246 746 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 CA14Q9ULX7 337 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 MFHAS1Q9Y4C4 1052 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 PIAS3Q9Y6X2 628 aa16.81■□□□□ 0.28
LIMS2-217ENST00000545738 C3orf70A6NLC5 250 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms