RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 CYTH4Q9UIA0 394 aa20.63■□□□□ 0.89
CHD4-213ENST00000545584 ANGPTL2Q9UKU9 493 aa20.63■□□□□ 0.89
CHD4-213ENST00000545584 CKAP5Q14008 2032 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 CEACAM1P13688 526 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 PRKCSHP14314 528 aaPredicted RBP20.62■□□□□ 0.89
CHD4-213ENST00000545584 ERCC5P28715 1186 aaPredicted RBP20.62■□□□□ 0.89
CHD4-213ENST00000545584 CD70P32970 193 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 SNX16P57768 344 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 APBA1Q02410 837 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 CDH18Q13634 790 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 MS4A13Q5J8X5 152 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 CACUL1Q86Y37 369 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 CARNMT1Q8N4J0 409 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 CADM4Q8NFZ8 388 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 FIBINQ8TAL6 211 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 TMEM245Q9H330 911 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 SLC32A1Q9H598 525 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 CAPN10Q9HC96 672 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 TJP2Q9UDY2 1190 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 SUN2Q9UH99 717 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 SLC12A6Q9UHW9 1150 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 DNAJC12Q9UKB3 198 aa20.62■□□□□ 0.89
CHD4-213ENST00000545584 ARHGAP33O14559 1287 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 TRUB2O95900 331 aaKnown RBP20.61■□□□□ 0.89
CHD4-213ENST00000545584 GLI1P08151 1106 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 PMLP29590 882 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 KRT9P35527 623 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
CHD4-213ENST00000545584 ST8SIA6P61647 398 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 RPS24P62847 133 aaKnown RBP20.61■□□□□ 0.89
CHD4-213ENST00000545584 PLEKHG6Q3KR16 790 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 DPCR1Q3MIW9 517 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 DCAF6Q58WW2 860 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 EFHC1Q5JVL4 640 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 WFDC5Q8TCV5 224 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 PPP1R13BQ96KQ4 1090 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 BTN2A3PQ96KV6 586 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 PRICKLE1Q96MT3 831 aaPredicted RBP20.61■□□□□ 0.89
CHD4-213ENST00000545584 NUCKS1Q9H1E3 243 aaKnown RBP20.61■□□□□ 0.89
CHD4-213ENST00000545584 LHX5Q9H2C1 402 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 FSCN3Q9NQT6 498 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 PCDHGC3Q9UN70 934 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 CEP83Q9Y592 693 aa20.61■□□□□ 0.89
CHD4-213ENST00000545584 TPRP12270 2363 aaKnown RBP20.61■□□□□ 0.89
CHD4-213ENST00000545584 KCNJ18B7U540 433 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 OPHN1O60890 802 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 MOCS3O95396 460 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 IGLV3-19P01714 112 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 ASLP04424 464 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 CDK17Q00537 523 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 ZNF252P-AS1Q0IIN9 211 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 PTPRNQ16849 979 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 VWA3BQ502W6 1294 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 ZC3H12AQ5D1E8 599 aaKnown RBP20.6■□□□□ 0.89
CHD4-213ENST00000545584 CHSY1Q86X52 802 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 PASD1Q8IV76 773 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 LGI2Q8N0V4 545 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 ZNF366Q8N895 744 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 ATP6V0D2Q8N8Y2 350 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 TUBGCP2Q9BSJ2 902 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 NDST4Q9H3R1 872 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 FAM204AQ9H8W3 233 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.6■□□□□ 0.89
CHD4-213ENST00000545584 ASNSD1Q9NWL6 643 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 NFE2L3Q9Y4A8 694 aa20.6■□□□□ 0.89
CHD4-213ENST00000545584 H0Y626 953 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 PES1O00541 588 aaKnown RBP20.59■□□□□ 0.89
CHD4-213ENST00000545584 GIPC1O14908 333 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 HSF2BPO75031 334 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 LUC7L3O95232 432 aaKnown RBP20.59■□□□□ 0.89
CHD4-213ENST00000545584 SLC2A3P11169 496 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 MAOBP27338 520 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 BPIFB4P59827 614 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 ZBTB16Q05516 673 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 RAP1GAP2Q684P5 730 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 FAM124AQ86V42 546 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 CFAP52Q8N1V2 620 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 MINDY1Q8N5J2 469 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 DEFB124Q8NES8 71 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 DNASE2BQ8WZ79 361 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 RNF34Q969K3 372 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 TTC17Q96AE7 1141 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 CPXM1Q96SM3 734 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 MIR1-1HGQ9H1L0 117 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 SYNCQ9H7C4 482 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 SIX2Q9NPC8 291 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 PRSS16Q9NQE7 514 aa20.59■□□□□ 0.89
CHD4-213ENST00000545584 KIAA1522Q9P206 1035 aaPredicted RBP20.59■□□□□ 0.89
CHD4-213ENST00000545584 ASCC3Q8N3C0 2202 aaKnown RBP20.58■□□□□ 0.89
CHD4-213ENST00000545584 A0A1B0GTW7 788 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 METTL12A8MUP2 240 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 F5H5T6 163 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 FOXN3O00409 490 aaPredicted RBP20.58■□□□□ 0.89
CHD4-213ENST00000545584 IGLV3-25P01717 112 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 DNTTP04053 509 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 ABCB4P21439 1286 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 TACR2P21452 398 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 CSKP41240 450 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 TTC31Q49AM3 519 aaPredicted RBP20.58■□□□□ 0.89
CHD4-213ENST00000545584 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms