RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC6A18Q96N87 628 aa15.37■□□□□ 0.05
RTN3-214ENST00000545432 MAGEF1Q9HAY2 307 aa15.37■□□□□ 0.05
RTN3-214ENST00000545432 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
RTN3-214ENST00000545432 HBS1LQ9Y450 684 aaKnown RBP15.37■□□□□ 0.05
RTN3-214ENST00000545432 WNT9AO14904 365 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 BRINP1O60477 761 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 PPP6R2O75170 966 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 HLA-DRAP01903 254 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 ATP5BP06576 529 aaKnown RBP15.36■□□□□ 0.05
RTN3-214ENST00000545432 PABPC1P11940 636 aaKnown RBP15.36■□□□□ 0.05
RTN3-214ENST00000545432 CKMT2P17540 419 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 ACP1P24666 158 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 CD38P28907 300 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 YWHAGP61981 247 aaKnown RBP eCLIP15.36■□□□□ 0.05
RTN3-214ENST00000545432 ADGRF1Q5T601 910 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 EID2Q8N6I1 236 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 HIC2Q96JB3 615 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 SLC39A2Q9NP94 309 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 ABCB8Q9NUT2 735 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 NCKAP1Q9Y2A7 1128 aa15.36■□□□□ 0.05
RTN3-214ENST00000545432 MAPK13O15264 365 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 ABCB4P21439 1286 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 SYT1P21579 422 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 NXPH1P58417 271 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 INSM1Q01101 510 aaPredicted RBP15.35■□□□□ 0.05
RTN3-214ENST00000545432 RHDQ02161 417 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 ENPEPQ07075 957 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 SFSWAPQ12872 951 aaKnown RBP15.35■□□□□ 0.05
RTN3-214ENST00000545432 BNIP3Q12983 259 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 HNRNPA1L2Q32P51 320 aaKnown RBP15.35■□□□□ 0.05
RTN3-214ENST00000545432 ARHGAP17Q68EM7 881 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 NCEH1Q6PIU2 408 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 PIGZQ86VD9 579 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 OR2T34Q8NGX1 318 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 FAM131CQ96AQ9 280 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 DHX58Q96C10 678 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 ARID3AQ99856 593 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 NEUROG2Q9H2A3 272 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 GDF3Q9NR23 364 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 OLA1Q9NTK5 396 aaKnown RBP15.35■□□□□ 0.05
RTN3-214ENST00000545432 FBXL12Q9NXK8 326 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 SERGEFQ9UGK8 458 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 FZD4Q9ULV1 537 aa15.35■□□□□ 0.05
RTN3-214ENST00000545432 PDXKO00764 312 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 LATO43561 262 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 DXOO77932 396 aaKnown RBP15.34■□□□□ 0.05
RTN3-214ENST00000545432 ARRB1P49407 418 aaPredicted RBP15.34■□□□□ 0.05
RTN3-214ENST00000545432 HARS2P49590 506 aaKnown RBP15.34■□□□□ 0.05
RTN3-214ENST00000545432 PROX2Q3B8N5 592 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 SHC4Q6S5L8 630 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 IQCHQ86VS3 1027 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 OXR1Q8N573 874 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 ANKRD52Q8NB46 1076 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 WFDC5Q8TCV5 224 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 MRGPRX3Q96LB0 322 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 ZNF578Q96N58 590 aaPredicted RBP15.34■□□□□ 0.05
RTN3-214ENST00000545432 ZSCAN16Q9H4T2 348 aaPredicted RBP15.34■□□□□ 0.05
RTN3-214ENST00000545432 CLCA2Q9UQC9 943 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 MTMR6Q9Y217 621 aa15.34■□□□□ 0.05
RTN3-214ENST00000545432 MYLKQ15746 1914 aa15.33■□□□□ 0.05
RTN3-214ENST00000545432 LRRC72A6NJI9 287 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 TLR4O00206 839 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 KLRC4O43908 158 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 ZBED1O96006 694 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 GLDCP23378 1020 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 CASP1P29466 404 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 CD70P32970 193 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 E2F1Q01094 437 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 KCNH2Q12809 1159 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 STK4Q13043 487 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 CST6Q15828 149 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 C9orf64Q5T6V5 341 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 PIK3R6Q5UE93 754 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 SPATS2Q86XZ4 545 aaKnown RBP15.33■□□□□ 0.04
RTN3-214ENST00000545432 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 SCML4Q8N228 414 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 ZNF557Q8N988 423 aaPredicted RBP15.33■□□□□ 0.04
RTN3-214ENST00000545432 MFSD2AQ8NA29 543 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 ZNF248Q8NDW4 579 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 FIBINQ8TAL6 211 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 AZIN2Q96A70 460 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 FAM129BQ96TA1 746 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 NIF3L1Q9GZT8 377 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 MTG2Q9H4K7 406 aa15.33■□□□□ 0.04
RTN3-214ENST00000545432 INTS6Q9UL03 887 aaKnown RBP15.33■□□□□ 0.04
RTN3-214ENST00000545432 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
RTN3-214ENST00000545432 B8ZZF3 427 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 SPTLC2O15270 562 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 SIN3BO75182 1162 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 IGLV3-27P01718 113 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 ASLP04424 464 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 POLR2EP19388 210 aaKnown RBP15.32■□□□□ 0.04
RTN3-214ENST00000545432 SGSHP51688 502 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 CXADRP78310 365 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 CCDC173Q0VFZ6 552 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 CDCP2Q5VXM1 449 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 RSRC2Q7L4I2 434 aaKnown RBP15.32■□□□□ 0.04
RTN3-214ENST00000545432 TTC39CQ8N584 583 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 SLC4A11Q8NBS3 891 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms