RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC78-216ENST00000544996 SLC30A5Q8TAD4 765 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 FIBINQ8TAL6 211 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 LOXL4Q96JB6 756 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 ZC3H10Q96K80 434 aaKnown RBP16.28■□□□□ 0.2
CCDC78-216ENST00000544996 SPACA7Q96KW9 195 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 PRICKLE1Q96MT3 831 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-216ENST00000544996 AGPAT1Q99943 283 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 WDCPQ9H6R7 721 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 VPS13AQ96RL7 3174 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 ATG2BQ96BY7 2078 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 A0A1W2PQF6 199 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 H0Y626 953 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 RHOBTB1O94844 696 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 UNGP13051 313 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-216ENST00000544996 CENPCQ03188 943 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 DEUP1Q05D60 604 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 CLEC16AQ2KHT3 1053 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 RABGAP1LQ5R372 815 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-216ENST00000544996 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 SERPINA13PQ6UXR4 307 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 KIAA0907Q7Z7F0 614 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-216ENST00000544996 NT5C3BQ969T7 300 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 PGAP3Q96FM1 320 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-216ENST00000544996 PCDHB18PQ96TA0 734 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 C11orf70Q9BRQ4 267 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 PIGVQ9NUD9 493 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 ADAM22Q9P0K1 906 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 INVSQ9Y283 1065 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 USP34Q70CQ2 3546 aa16.27■□□□□ 0.2
CCDC78-216ENST00000544996 WASH3PC4AMC7 463 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 DCLK1O15075 740 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 MAP3K13O43283 966 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 LRP3O75074 770 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 PAGE1O75459 146 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 LUC7L3O95232 432 aaKnown RBP16.26■□□□□ 0.19
CCDC78-216ENST00000544996 MOCS3O95396 460 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 CALB1P05937 261 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 GABRG2P18507 467 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 POLR2EP19388 210 aaKnown RBP16.26■□□□□ 0.19
CCDC78-216ENST00000544996 CD70P32970 193 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 FLT3P36888 993 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 IL12RB1P42701 662 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 CXCR3P49682 368 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 UBASH3AP57075 661 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 FANCCQ00597 558 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 ENPP2Q13822 863 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 ZNF234Q14588 700 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 PLK5Q496M5 336 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 BRMS1LQ5PSV4 323 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 MBLAC2Q68D91 279 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 ADIPOR2Q86V24 386 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 KIAA2013Q8IYS2 634 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 OLIG1Q8TAK6 271 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 SORCS1Q8WY21 1168 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 MYEOVQ96EZ4 313 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 TBCBQ99426 244 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 PRMT1Q99873 361 aaKnown RBP16.26■□□□□ 0.19
CCDC78-216ENST00000544996 EDEM3Q9BZQ6 932 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 METTL5Q9NRN9 209 aaKnown RBP16.26■□□□□ 0.19
CCDC78-216ENST00000544996 KIAA1522Q9P206 1035 aaPredicted RBP16.26■□□□□ 0.19
CCDC78-216ENST00000544996 RAD54BQ9Y620 910 aa16.26■□□□□ 0.19
CCDC78-216ENST00000544996 DMDP11532 3685 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 LRRC53A6NM62 1247 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 DLDP09622 509 aaKnown RBP16.25■□□□□ 0.19
CCDC78-216ENST00000544996 TNFAIP3P21580 790 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 AUHQ13825 339 aaKnown RBP16.25■□□□□ 0.19
CCDC78-216ENST00000544996 ASIC2Q16515 512 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 FNDC3BQ53EP0 1204 aaKnown RBP16.25■□□□□ 0.19
CCDC78-216ENST00000544996 ACBD5Q5T8D3 534 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-216ENST00000544996 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 PPP1R2P3Q6NXS1 205 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 PHF13Q86YI8 300 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-216ENST00000544996 WFDC5Q8TCV5 224 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 BAP1Q92560 729 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 RPRD1AQ96P16 312 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-216ENST00000544996 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 TKTL2Q9H0I9 626 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 SIK2Q9H0K1 926 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 ARHGEF38Q9NXL2 777 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 CALCOCO1Q9P1Z2 691 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
CCDC78-216ENST00000544996 A0A1B0GVM2 712 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 TCAF2A6NFQ2 919 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 ZNF217O75362 1048 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 ADCY5O95622 1261 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 EPHX1P07099 455 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 KRT3P12035 628 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 PDGFRAP16234 1089 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 NDUFV2P19404 249 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-216ENST00000544996 SDC4P31431 198 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 RDXP35241 583 aaKnown RBP16.24■□□□□ 0.19
CCDC78-216ENST00000544996 P2RY2P41231 377 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 OXCT1P55809 520 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms