RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 ATP6AP1LQ52LC2 224 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 APOBEC3HQ6NTF7 200 aaKnown RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 PLPPR4Q7Z2D5 763 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 B4GALNT2Q8NHY0 566 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 C18orf25Q96B23 403 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 SKA1Q96BD8 255 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 APOPT1Q96IL0 206 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 QRFPRQ96P65 431 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 NRDE2Q9H7Z3 1164 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ACTR8Q9H981 624 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 POPDC2Q9HBU9 364 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 NOD2Q9HC29 1040 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 FAM153AQ9UHL3 310 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ADAM28Q9UKQ2 775 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 UBDO15205 165 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 TNFRSF8P28908 595 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 NFIL3Q16649 462 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 CENPLQ8N0S6 344 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 MAGEC3Q8TD91 643 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ATG4AQ8WYN0 398 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 PNKPQ96T60 521 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 OSMRQ99650 979 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ASCC2Q9H1I8 757 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 KCNMB3Q9NPA1 279 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 RGS18Q9NS28 235 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ABCC13Q9NSE7 274 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 BLOC1S4Q9NUP1 217 aa9.22□□□□□ -0.93
NECAP1-207ENST00000544891 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
NECAP1-207ENST00000544891 ZSCAN5CA6NGD5 496 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 SLC15A5A6NIM6 579 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 PDHXO00330 501 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 MAP3K7CLP57077 242 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 MMRN1Q13201 1228 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 NFYCQ13952 458 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 ZCCHC8Q6NZY4 707 aaKnown RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 C12orf56Q8IXR9 622 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 TTC30BQ8N4P2 665 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 KYQ8NBH2 561 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 MCOLN3Q8TDD5 553 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 ACMSDQ8TDX5 336 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 MAGED4Q96JG8 741 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 TMEM237Q96Q45 408 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 PPP1R10Q96QC0 940 aaKnown RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 MCCC1Q96RQ3 725 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 COMMD8Q9NX08 183 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 RABGEF1Q9UJ41 708 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 DNAJC16Q9Y2G8 782 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 C2CD2Q9Y426 696 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 ASTN2O75129 1339 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 WNT10BO00744 389 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 KPNA5O15131 536 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 SYNCRIPO60506 623 aaKnown RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 VTNP04004 478 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 YY1P25490 414 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 SERPINB3P29508 390 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 AIF1P55008 147 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 EPS8Q12929 822 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 CYB5D1Q6P9G0 228 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 C1orf186Q6ZWK4 172 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 NT5DC3Q86UY8 548 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 ZCCHC9Q8N567 271 aaKnown RBP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 NKX2-3Q8TAU0 364 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 TMEM121Q9BTD3 319 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 FTHL17Q9BXU8 183 aa9.21□□□□□ -0.93
NECAP1-207ENST00000544891 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.93
NECAP1-207ENST00000544891 SYNDIG1LA6NDD5 238 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 SIGLEC16A6NMB1 481 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 RIPK2O43353 540 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 LTFP02788 710 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 OR56A5P0C7T3 313 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 RPL9P32969 192 aaKnown RBP9.21□□□□□ -0.94
NECAP1-207ENST00000544891 SLC12A3P55017 1021 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 SMARCB1Q12824 385 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 CYP51A1Q16850 503 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 SGO1Q5FBB7 561 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 TMEM154Q6P9G4 183 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 RFWD2Q8NHY2 731 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 ZNF398Q8TD17 642 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 EPS8L3Q8TE67 593 aaKnown RBP9.21□□□□□ -0.94
NECAP1-207ENST00000544891 BSNDQ8WZ55 320 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 UBE2E3Q969T4 207 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 CENPTQ96BT3 561 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 NT5MQ9NPB1 228 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 TCF7L2Q9NQB0 619 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 C6orf203Q9P0P8 240 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-207ENST00000544891 CHADO15335 359 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 SEC24DO94855 1032 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-207ENST00000544891 PSMC3P17980 439 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 RASA2Q15283 850 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 KCNT1Q5JUK3 1230 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 FAXCQ5TGI0 409 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 TMC7Q7Z402 723 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 ADGRA1Q86SQ6 560 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 CARNMT1Q8N4J0 409 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 WNT8BQ93098 351 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 OTULINQ96BN8 352 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms