RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	CDC23	Q9UJX2	597 aa		6.69	□□□□□ -1.34
CPSF7-222	ENST00000544585	CA14	Q9ULX7	337 aa		6.69	□□□□□ -1.34
CPSF7-222	ENST00000544585	ZFHX4	Q86UP3	3567 aa		6.69	□□□□□ -1.34
CPSF7-222	ENST00000544585	KANSL1L	A0AUZ9	987 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	LRRC10B	A6NIK2	292 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ANHX	E9PGG2	379 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	AKR1B10	O60218	316 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	TBC1D4	O60343	1298 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	N4BP1	O75113	896 aa	Known RBP	6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	SEC24D	O94855	1032 aa	Predicted RBP	6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ENDOD1	O94919	500 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	PLEKHA8P1	O95397	391 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	PAPLN	O95428	1278 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	SFPQ	P23246	707 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	CHKA	P35790	457 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	SREBF1	P36956	1147 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	GRK6	P43250	576 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	CLCN3	P51790	818 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	NAPA	P54920	295 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ANTXR2	P58335	489 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	NUCB1	Q02818	461 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ELF2	Q15723	593 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ST3GAL2	Q16842	350 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	TWF2	Q6IBS0	349 aa	Known RBP	6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	RPTN	Q6XPR3	784 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	HEATR3	Q7Z4Q2	680 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	FAM129C	Q86XR2	697 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	GPR65	Q8IYL9	337 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	LINC01465	Q8N7H1	131 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	OR5AN1	Q8NGI8	311 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	URGCP	Q8TCY9	931 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ALG3	Q92685	438 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	MAP4K1	Q92918	833 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	KIAA1191	Q96A73	305 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	CLPTM1L	Q96KA5	538 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ZNF577	Q9BSK1	485 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	NT5C3A	Q9H0P0	336 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	MANSC1	Q9H8J5	431 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	PNPLA8	Q9NP80	782 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	UBN1	Q9NPG3	1134 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	ZSCAN32	Q9NX65	697 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	DOCK5	Q9H7D0	1870 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	LOXHD1	Q8IVV2	1947 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	CACNA1I	Q9P0X4	2223 aa		6.68	□□□□□ -1.34
CPSF7-222	ENST00000544585	EVPL	Q92817	2033 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	KIAA1671	Q9BY89	1806 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	LRRC14B	A6NHZ5	514 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	FAM86B1	E9PN63	330 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	NRP1	O14786	923 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	INPPL1	O15357	1258 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	GLUD1	P00367	558 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	PRNP	P04156	253 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ADRB1	P08588	477 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	FAM86B2	P0C5J1	330 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	THBS2	P35442	1172 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	MAPKAPK2	P49137	400 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	SLC11A1	P49279	550 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ADCY7	P51828	1080 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	MAPK10	P53779	464 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	SET	Q01105	290 aa	Predicted RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	PTH1R	Q03431	593 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	CSTF1	Q05048	431 aa	Known RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	SKIDA1	Q1XH10	827 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	TUBB8	Q3ZCM7	444 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	SLC44A4	Q53GD3	710 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	NKAPL	Q5M9Q1	402 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ADGRF1	Q5T601	910 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	CD300LD	Q6UXZ3	194 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	LIPI	Q6XZB0	460 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	TMTC3	Q6ZXV5	915 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	MRPL10	Q7Z7H8	261 aa	Known RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ZNF410	Q86VK4	478 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	TMEM173	Q86WV6	379 aa	Predicted RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	PROSER1	Q86XN7	944 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	MAML2	Q8IZL2	1156 aa	Predicted RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	LRRC71	Q8N4P6	559 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	CCDC33	Q8N5R6	958 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	TEX19	Q8NA77	164 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ZBTB44	Q8NCP5	570 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	CNNM3	Q8NE01	707 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	SMG7	Q92540	1137 aa	Known RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	DYDC2	Q96IM9	177 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	MYADM	Q96S97	322 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	DLL4	Q9NR61	685 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	PNPO	Q9NVS9	261 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	C19orf73	Q9NVV2	129 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	RBM28	Q9NW13	759 aa	Known RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ZDHHC7	Q9NXF8	308 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	ARHGAP20	Q9P2F6	1191 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	PCDHA3	Q9Y5H8	950 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	DCHS1	Q96JQ0	3298 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	CLUH	O75153	1309 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	OTOGL	Q3ZCN5	2332 aa		6.67	□□□□□ -1.34
CPSF7-222	ENST00000544585	CHD6	Q8TD26	2715 aa		6.66	□□□□□ -1.34
CPSF7-222	ENST00000544585	IGLV3-22	A0A075B6J6	115 aa		6.66	□□□□□ -1.34
CPSF7-222	ENST00000544585		A0A087WZ62	844 aa		6.66	□□□□□ -1.34
CPSF7-222	ENST00000544585	IGKV6-21	A0A0C4DH24	114 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms