RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 CCT8P50990 548 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 CDH8P55286 799 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 OGDHQ02218 1023 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TDRPQ86YL5 185 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 CIB1Q99828 191 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TMEM79Q9BSE2 394 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 HGH1Q9BTY7 390 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 SSX2IPQ9Y2D8 614 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 A0A088AWK7 358 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 NFIBO00712 420 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 APOEP02649 317 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
PDZD4-209ENST00000544474 SNRPFP62306 86 aaKnown RBP13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CYP24A1Q07973 514 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 MTMR1Q13613 665 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 MAPK11Q15759 364 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 DCDC5Q6ZRR9 648 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 MCUQ8NE86 351 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 JOSD2Q8TAC2 188 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 GIN1Q9NXP7 522 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
PDZD4-209ENST00000544474 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CRTAMO95727 393 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 FUCA1P04066 466 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 KRT3P12035 628 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CASP2P42575 452 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 YAP1P46937 504 aaKnown RBP13.16□□□□□ -0.3
PDZD4-209ENST00000544474 GCNT1Q02742 428 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 TRPC3Q13507 836 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 SLC9A4Q6AI14 798 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 BORAQ6PGQ7 559 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF677Q86XU0 584 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 SNX29P2Q8IUI4 249 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CENPSQ8N2Z9 138 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 TMC2Q8TDI7 906 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 PPP1R13LQ8WUF5 828 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 DCAKDQ8WVC6 231 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 TARS2Q9BW92 718 aaKnown RBP13.16□□□□□ -0.3
PDZD4-209ENST00000544474 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 ACSS3Q9H6R3 686 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 PPCSQ9HAB8 311 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDZD4-209ENST00000544474 FAM47E-STBD1D6RA91 191 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 K7EPI3 171 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 SIN3BO75182 1162 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CKMT2P17540 419 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 AVPR1AP37288 418 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 SLC1A6P48664 564 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 C21orf59P57076 290 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 RALGDSQ12967 914 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 CCNYQ8ND76 341 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 PCDHAC1Q9H158 963 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 PRM3Q9NNZ6 103 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 COQ4Q9Y3A0 265 aa13.16□□□□□ -0.3
PDZD4-209ENST00000544474 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.3
PDZD4-209ENST00000544474 TM9SF1O15321 606 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 DNAJA2O60884 412 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 PABPC1P11940 636 aaKnown RBP13.15□□□□□ -0.3
PDZD4-209ENST00000544474 WNT7BP56706 349 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 CD300CQ08708 224 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 ITGADQ13349 1161 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 OLIG2Q13516 323 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 CCNIQ14094 377 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 MARVELD2Q8N4S9 558 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 CYGBQ8WWM9 190 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 ATP2A3Q93084 1043 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 BORCS5Q969J3 196 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 CEP295NLQ96MC4 621 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 BIRC8Q96P09 236 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 PCDH12Q9NPG4 1184 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 FAM58BPP0C7Q3 252 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
PDZD4-209ENST00000544474 CES4AQ5XG92 561 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 KCNT2Q6UVM3 1135 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 SAMD7Q7Z3H4 446 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 C10orf107Q8IVU9 208 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms