RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 ADAT2Q7Z6V5 191 aaKnown RBP8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 FAM72BQ86X60 149 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 LGI2Q8N0V4 545 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 CELF5Q8N6W0 485 aaKnown RBP8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 CEP112Q8N8E3 955 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 MAFAQ8NHW3 353 aaPredicted RBP8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 ADAMTS19Q8TE59 1207 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 TSC1Q92574 1164 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 SMARCD2Q92925 531 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 WBP2Q969T9 261 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 TBC1D31Q96DN5 1066 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 RNF157Q96PX1 679 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 CATSPERBQ9H7T0 1116 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 KIF9Q9HAQ2 790 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 DONSONQ9NYP3 566 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 TBC1D14Q9P2M4 693 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 PPARGC1AQ9UBK2 798 aaKnown RBP8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 CDH22Q9UJ99 828 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 VANGL2Q9ULK5 521 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 CCL26Q9Y258 94 aa8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 ZFP37Q9Y6Q3 630 aaPredicted RBP8.29□□□□□ -1.08
MRPL40P1-201ENST00000542687 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 TYW5A2RUC4 315 aaKnown RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 DRGXA6NNA5 263 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 H3BQ06 376 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 SLC9A3R1O14745 358 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 FGF10O15520 208 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 GREM1O60565 184 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 PRAMEF12O95522 483 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 TCF3P15923 654 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 RHOQP17081 205 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 KCNA5P22460 613 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 CHKAP35790 457 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 GGCXP38435 758 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 NR2C2P49116 596 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 DYNLT1P63172 113 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 DPYSQ14117 519 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 RABGAP1LQ5R372 815 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 SLC9A4Q6AI14 798 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 NADSYN1Q6IA69 706 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 RFWD3Q6PCD5 774 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 C1orf228Q6PIY5 440 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 Q6ZNB5 142 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 BBS12Q6ZW61 710 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 OTOP3Q7RTS5 596 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 PQLC3Q8N755 202 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 TTC13Q8NBP0 860 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 SMRP1Q8NCR6 262 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 PCDH19Q8TAB3 1148 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 HLA-CQ95604 372 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 E2F7Q96AV8 911 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 FAF2Q96CS3 445 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 TMA16Q96EY4 203 aaKnown RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 ASB16Q96NS5 453 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 RPRD1AQ96P16 312 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 PRMT1Q99873 361 aaKnown RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 AP1M1Q9BXS5 423 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 ZYG11BQ9C0D3 744 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 RETREG1Q9H6L5 497 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 UBE2ZQ9H832 354 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 L2HGDHQ9H9P8 463 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 ZFP14Q9HCL3 533 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 HOMER3Q9NSC5 361 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 THG1LQ9NWX6 298 aaKnown RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 SMARCAL1Q9NZC9 954 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 STOML2Q9UJZ1 356 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 USP15Q9Y4E8 981 aaPredicted RBP8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 CHD7Q9P2D1 2997 aa8.28□□□□□ -1.08
MRPL40P1-201ENST00000542687 IGLV3-10A0A075B6K4 115 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 TCRBV7S2A1N4TA0A589 114 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 HEPACAM2A8MVW5 462 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 TRDMT1O14717 391 aaKnown RBP8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 SCAMP3O14828 347 aaKnown RBP8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 TSPAN3O60637 253 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 CYBBP04839 570 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 CTAGE8P0CG41 777 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 LAMP2P13473 410 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 ERCC2P18074 760 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 TGM2P21980 687 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 HOXC13P31276 330 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 SLC6A4P31645 630 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 VIPR2P41587 438 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 ADCY2Q08462 1091 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 KLF1Q13351 362 aaPredicted RBP8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 SMAD4Q13485 552 aaKnown RBP8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 ZNF77Q15935 545 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 CCNG2Q16589 344 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 C5orf22Q49AR2 442 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 MPPE1Q53F39 396 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 FAM133BQ5BKY9 247 aaKnown RBP8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 MANEALQ5VSG8 457 aa8.27□□□□□ -1.09
MRPL40P1-201ENST00000542687 TTC39BQ5VTQ0 682 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms