RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 BST1Q10588 318 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 WASHC5Q12768 1159 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 SEMA3BQ13214 749 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 CRYMQ14894 314 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TAF2Q6P1X5 1199 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 RFX8Q6ZV50 586 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PDZD4Q76G19 769 aaPredicted RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 LONP2Q86WA8 852 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 NDUFAF2Q8N183 169 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TMEM86AQ8N2M4 240 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ENDOVQ8N8Q3 282 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 STKLD1Q8NE28 680 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ARNTL2Q8WYA1 636 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 NSL1Q96IY1 281 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 BTBD10Q9BSF8 475 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 BRD8Q9H0E9 1235 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MMADHCQ9H3L0 296 aaPredicted RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 CNGB3Q9NQW8 809 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 RNF19AQ9NV58 838 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 RRN3Q9NYV6 651 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 WDR27A2RRH5 827 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 M0QYT0 321 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 NCAM2O15394 837 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 LMNAP02545 664 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MYL2P10916 166 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 EPHB2P29323 1055 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 LHX1P48742 406 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 DAOAP59103 153 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PITX1P78337 314 aaPredicted RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ZBTB16Q05516 673 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 AP1B1Q10567 949 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ACCSLQ4AC99 568 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 RAB41Q5JT25 222 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 FAM182AQ5T1J6 154 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MROH9Q5TGP6 573 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PACS1Q6VY07 963 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 NUDCD3Q8IVD9 361 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PDCD7Q8N8D1 485 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ISL2Q96A47 359 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MIPEPQ99797 713 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TRIM56Q9BRZ2 755 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 WWP1Q9H0M0 922 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 KRT82Q9NSB4 513 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PIGVQ9NUD9 493 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PTCH2Q9Y6C5 1203 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ERI2A8K979 691 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MTSS1O43312 755 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 BEST1O76090 585 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 IGHA2P01877 340 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 FYNP06241 537 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MYL3P08590 195 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PSMB4P28070 264 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ELF1P32519 619 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TKTL1P51854 596 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 IFRD2Q12894 506 aaPredicted RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 CHI3L2Q15782 390 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TBCCQ15814 346 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 INSCQ1MX18 579 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MDH1BQ5I0G3 518 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 SPANXN3Q5MJ09 141 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PRAMEF19Q5SWL8 479 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 KIAA0319Q5VV43 1072 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 WSCD1Q658N2 575 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TWF2Q6IBS0 349 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 CRLF3Q8IUI8 442 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ZNF567Q8N184 647 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 UPF1Q92900 1129 aaKnown RBP eCLIP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 RSRC1Q96IZ7 334 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 MECRQ9BV79 373 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 SLC13A1Q9BZW2 595 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 AP5M1Q9H0R1 490 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 PRDM12Q9H4Q4 367 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 STN1Q9H668 368 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 WDR6Q9NNW5 1121 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 ARL8BQ9NVJ2 186 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 DDX43Q9NXZ2 648 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 FLRT1Q9NZU1 646 aa6.73□□□□□ -1.33
PTPRO-208ENST00000542557 HBS1LQ9Y450 684 aaKnown RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 TRIP12Q14669 1992 aaPredicted RBP6.73□□□□□ -1.33
PTPRO-208ENST00000542557 CLDN5O00501 218 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 FCHO1O14526 889 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ALDOAP04075 364 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 POLBP06746 335 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 PAX3P23760 479 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ACAT1P24752 427 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MGAT1P26572 445 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ADRA1BP35368 520 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 PPIDQ08752 370 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 SYPL2Q5VXT5 272 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CASC4Q6P4E1 433 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CCDC33Q8N5R6 958 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 NSMCE1Q8WV22 266 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 NDRG1Q92597 394 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ATP2A3Q93084 1043 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 LENG1Q96BZ8 264 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 SENP8Q96LD8 212 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 SPOCK3Q9BQ16 436 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms