RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 THOC5Q13769 683 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 WDR72Q3MJ13 1102 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 SYCP2LQ5T4T6 812 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 MFSD5Q6N075 450 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PPP4R4Q6NUP7 873 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 C1orf228Q6PIY5 440 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 TRPV1Q8NER1 839 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CDKL2Q92772 493 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 AZIN2Q96A70 460 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 HAUS1Q96CS2 278 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 SLC39A13Q96H72 371 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 RUNDC3BQ96NL0 473 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 ZIC5Q96T25 663 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 MIPEPQ99797 713 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CADM1Q9BY67 442 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 FOXP3Q9BZS1 431 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 SNX25Q9H3E2 840 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 RPF1Q9H9Y2 349 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 HPS4Q9NQG7 708 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PIH1D1Q9NWS0 290 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PARP2Q9UGN5 583 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 NRCAMQ92823 1304 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 NOTOA8MTQ0 251 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 THAP12O43422 761 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM191BP0C7N4 346 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ALAS2P22557 587 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 RGS2P41220 211 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 VPS41P49754 854 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 YARSP54577 528 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 AP1B1Q10567 949 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 RALGDSQ12967 914 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TMED2Q15363 201 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TRIP13Q15645 432 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 LRRC36Q1X8D7 754 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF699Q32M78 642 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 HSP90AA5PQ58FG0 334 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ISLR2Q6UXK2 745 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MILR1Q7Z6M3 343 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PRUNE1Q86TP1 453 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PHF13Q86YI8 300 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MAP7D3Q8IWC1 876 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 IRGQQ8WZA9 623 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ANKRD36BP1Q96IX9 119 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TTC1Q99614 292 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CXCL16Q9H2A7 254 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CISHQ9NSE2 258 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 DDX18Q9NVP1 670 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 Q9Y3F1 56 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SMIM35A0A1B0GVV1 85 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TCRBV5S1A1TA0A578 114 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MIF4GDA9UHW6 222 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 DDHD2O94830 711 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 OR6B1O95007 311 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TNNC2P02585 160 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ASLP04424 464 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ITGA2BP08514 1039 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 VAV1P15498 845 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CYP2B6P20813 491 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CTNNA2P26232 953 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SERPINB8P50452 374 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PPP2R5EQ16537 467 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 KIZQ2M2Z5 673 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TNFAIP8L3Q5GJ75 292 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SDE2Q6IQ49 451 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TTC27Q6P3X3 843 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TUBA3EQ6PEY2 450 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TRIM72Q6ZMU5 477 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CAND1Q86VP6 1230 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ST13P4Q8IZP2 240 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CARNMT1Q8N4J0 409 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF606Q8WXB4 792 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SOCS4Q8WXH5 440 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 GFM2Q969S9 779 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 NSMCE3Q96MG7 304 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SERPINB12Q96P63 405 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TBCBQ99426 244 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM109Q9BVC6 243 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 IMPG2Q9BZV3 1241 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SDCBP2Q9H190 292 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ASB7Q9H672 318 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 SLC4A7Q9Y6M7 1214 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 WDR91A4D1P6 747 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 GOLGA8TH3BQL2 631 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MAGEB3O15480 346 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MAP3K6O95382 1288 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 NDUFV2P19404 249 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CDH5P33151 784 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 GRM5P41594 1212 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TM4SF4P48230 202 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PSEN2P49810 448 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CDK7P50613 346 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ZBTB16Q05516 673 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MESDQ14696 234 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 NR1D2Q14995 579 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 KYAT1Q16773 422 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms