RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PAGE1O75459 146 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 ADCY5O95622 1261 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 APBB3O95704 486 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 RRM1P23921 792 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 NTSR1P30989 418 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 RDXP35241 583 aaKnown RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 GGCXP38435 758 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 PRKCIP41743 596 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CXCR3P49682 368 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 MRE11P49959 708 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 DGKEP52429 567 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 GSCP56915 257 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 SRSF5Q13243 272 aaKnown RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 MTA1Q13330 715 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CDH18Q13634 790 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CRY1Q16526 586 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CDO1Q16878 200 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 C15orf59Q2T9L4 293 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 TDRD12Q587J7 1177 aaKnown RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 BRMS1LQ5PSV4 323 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 TMEM215Q68D42 235 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 SPECC1LQ69YQ0 1117 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 SDE2Q6IQ49 451 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 ANO7Q6IWH7 933 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 DNAJC24Q6P3W2 148 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 LONP2Q86WA8 852 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CIR1Q86X95 450 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 FAM131BQ86XD5 332 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 DNAAF5Q86Y56 855 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 MFN1Q8IWA4 741 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 MCOLN2Q8IZK6 566 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 C3orf20Q8ND61 904 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 TSTD1Q8NFU3 115 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 JOSD2Q8TAC2 188 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 OLIG1Q8TAK6 271 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 WFDC5Q8TCV5 224 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 UCMAQ8WVF2 138 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 RXFP2Q8WXD0 754 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 SORCS1Q8WY21 1168 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 SYN2Q92777 582 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 ERLEC1Q96DZ1 483 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 PGAP3Q96FM1 320 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 PRMT1Q99873 361 aaKnown RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 TKTL2Q9H0I9 626 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 SIK2Q9H0K1 926 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 ELOVL2Q9NXB9 296 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CACNA2D2Q9NY47 1150 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 GGA2Q9UJY4 613 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 PAXBP1Q9Y5B6 917 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNHG1-215ENST00000540904 HS3ST4Q9Y661 456 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 ITIH6Q6UXX5 1313 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 CACNA1IQ9P0X4 2223 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 TCRBV21S2A2A0A5A6 115 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 SIGLEC16A6NMB1 481 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 WASH3PC4AMC7 463 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 H0Y626 953 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 AXIN1O15169 862 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 HRO43593 1189 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 LILRB5O75023 590 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 LMNAP02545 664 aaKnown RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 FTLP02792 175 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 SERPING1P05155 500 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 HOXB2P14652 356 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 HNRNPLP14866 589 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 SDC4P31431 198 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 CASP14P31944 242 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 CD70P32970 193 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 RFC1P35251 1148 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 AUHQ13825 339 aaKnown RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 EIF4HQ15056 248 aaKnown RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 CCDC14Q49A88 953 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 RAB6CQ53S08 254 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 RABGAP1LQ5R372 815 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 SH3PXD2AQ5TCZ1 1133 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 PPP1R2P3Q6NXS1 205 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 FBXL22Q6P050 247 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 CHST9Q7L1S5 443 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 ASCL5Q7RTU5 278 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 ADIPOR2Q86V24 386 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 WDR5BQ86VZ2 330 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 AHI1Q8N157 1196 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF557Q8N988 423 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 FIBINQ8TAL6 211 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 RPRD1AQ96P16 312 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 MCEEQ96PE7 176 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 RAB6CQ9H0N0 254 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 SEMA4AQ9H3S1 761 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 POLMQ9NP87 494 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 ANLNQ9NQW6 1124 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 TMPRSS4Q9NRS4 437 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms