RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
BNIP3-202ENST00000540159 DPYSL2Q16555 572 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 TSNAXIP1Q2TAA8 658 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 TCHHL1Q5QJ38 904 aaPredicted RBP14.04□□□□□ -0.16
BNIP3-202ENST00000540159 WASHC2DQ5SRD0 308 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 NAIF1Q69YI7 327 aaPredicted RBP14.04□□□□□ -0.16
BNIP3-202ENST00000540159 PACS1Q6VY07 963 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 OSTM1Q86WC4 334 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 MAB21L3Q8N8X9 362 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 ARRDC4Q8NCT1 418 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 RNF139Q8WU17 664 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 FAXDC2Q96IV6 333 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 VRTNQ9H8Y1 702 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 PIGVQ9NUD9 493 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 DONSONQ9NYP3 566 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SHROOM3Q8TF72 1996 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 FAM159BA6NKW6 160 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SPAG6O75602 509 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 CYP2C9P11712 490 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 GRM5P41594 1212 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SLC1A6P48664 564 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SLC8A3P57103 927 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 HSP90AA5PQ58FG0 334 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 CERCAMQ5T4B2 595 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 WSCD1Q658N2 575 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF567Q8N184 647 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 APPL2Q8NEU8 664 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 FBXO41Q8TF61 875 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 HASPINQ8TF76 798 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SNX27Q96L92 541 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 FCRL3Q96P31 734 aaPredicted RBP14.04□□□□□ -0.16
BNIP3-202ENST00000540159 PANX3Q96QZ0 392 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 WWP1Q9H0M0 922 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 STOML1Q9UBI4 398 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SLC7A8Q9UHI5 535 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 TTC3P53804 2025 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SPECC1L-ADORA2AF8WAN1 911 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 TRAFD1O14545 582 aaPredicted RBP14.04□□□□□ -0.16
BNIP3-202ENST00000540159 NRP1O14786 923 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 WFS1O76024 890 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 ITGA2BP08514 1039 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 BCAT1P54687 386 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 RNF220Q5VTB9 566 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SLC27A1Q6PCB7 646 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SCUBE1Q8IWY4 988 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■■■■ 93
BNIP3-202ENST00000540159 ULK2Q8IYT8 1036 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 GPRC5AQ8NFJ5 357 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 PPTC7Q8NI37 304 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 LRRC4Q9HBW1 653 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SIRPGQ9P1W8 387 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 PPM1HQ9ULR3 514 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 A0A0A0MRY4 1105 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 PDHXO00330 501 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 TREHO43280 583 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 BLMHQ13867 455 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 FAM187BQ17R55 369 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 ANKRD52Q8NB46 1076 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF398Q8TD17 642 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 ARNTL2Q8WYA1 636 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 SLC10A4Q96EP9 437 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 MARK4Q96L34 752 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 QKIQ96PU8 341 aaKnown RBP eCLIP14.03□□□□□ -0.16
BNIP3-202ENST00000540159 MROH8Q9H579 483 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 PIDD1Q9HB75 910 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 NUDT5Q9UKK9 219 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 FIS1Q9Y3D6 152 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 SDR42E2A6NKP2 422 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 I6L893 689 aaPredicted RBP14.03□□□□□ -0.16
BNIP3-202ENST00000540159 DGKIO75912 1065 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 PROCP04070 461 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 MMP3P08254 477 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 TWF2Q6IBS0 349 aaKnown RBP14.03□□□□□ -0.16
BNIP3-202ENST00000540159 RNF148Q8N7C7 305 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 SIK2Q9H0K1 926 aa14.03□□□□□ -0.16
BNIP3-202ENST00000540159 SMAPO00193 183 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 CXCL11O14625 94 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 DCXO43602 365 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 HUS1O60921 280 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 GCATO75600 419 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 LINGO3P0C6S8 592 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 USP17L7P0C7H9 530 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 ATP6V1C1P21283 382 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 VHLP40337 213 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 CACNA2D1P54289 1103 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 DEUP1Q05D60 604 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF460Q14592 562 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 SLC26A9Q7LBE3 791 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 GPRIN1Q7Z2K8 1008 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 LMNTD2Q8IXW0 634 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 SIX6OS1Q8N1H7 587 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 PHTF2Q8N3S3 785 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 LINC01465Q8N7H1 131 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 TEKT4Q8WW24 435 aa14.02□□□□□ -0.16
BNIP3-202ENST00000540159 LPPQ93052 612 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms