RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CRLF3Q8IUI8 442 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 MCUQ8NE86 351 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 RNF139Q8WU17 664 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 SPATA13Q96N96 652 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 OLFM3Q96PB7 478 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 FZD10Q9ULW2 581 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 DOCK3Q8IZD9 2030 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 ZSWIM8A7E2V4 1837 aa14.47□□□□□ -0.09
UBE3B-210ENST00000539599 BTBD19C9JJ37 291 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 TRDMT1O14717 391 aaKnown RBP14.46□□□□□ -0.09
UBE3B-210ENST00000539599 DGKIO75912 1065 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PSMG1O95456 288 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 SMIM10L2AP0DMW4 78 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 SMIM10L2BP0DMW5 78 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 FGF3P11487 239 aaPredicted RBP14.46□□□□□ -0.09
UBE3B-210ENST00000539599 CYP2C9P11712 490 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 SAT1P21673 171 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 ARL4AP40617 200 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PTPN9P43378 593 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 WSCD1Q658N2 575 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PAQR9Q6ZVX9 377 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 DNAJC9Q8WXX5 260 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
UBE3B-210ENST00000539599 CRHR1P34998 444 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PDE1BQ01064 536 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 USP4Q13107 963 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 MBLAC2Q68D91 279 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 FASTKD5Q7L8L6 764 aaKnown RBP14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PID1Q7Z2X4 250 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 RASSF3Q86WH2 238 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PNPLA1Q8N8W4 532 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 SMC1BQ8NDV3 1235 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 HIPK4Q8NE63 616 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.09
UBE3B-210ENST00000539599 EDEM1Q92611 657 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 C7orf26Q96N11 449 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 PANX3Q96QZ0 392 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 GORASP1Q9BQQ3 440 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 DCLRE1BQ9H816 532 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 LRRC42Q9Y546 428 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 RPS6KL1Q9Y6S9 549 aa14.46□□□□□ -0.09
UBE3B-210ENST00000539599 ATP9BO43861 1147 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SNNO75324 88 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 STAU1O95793 577 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 TPSB2P20231 275 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 PCLAFQ15004 111 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 TPSAB1Q15661 275 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 PAN2Q504Q3 1202 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 TEDDM1Q5T9Z0 273 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 LGSNQ5TDP6 509 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 NPWQ8N729 165 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 APPL2Q8NEU8 664 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 FAXDC2Q96IV6 333 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 GCOM2Q9BZD3 368 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CYP4F11Q9HBI6 524 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SHROOM3Q8TF72 1996 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 LOC100653049A0A140TA62 436 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 DPPA5A6NC42 116 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 PIRO00625 290 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 KRT34O76011 436 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 PDE5AO76074 875 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 ITGA2BP08514 1039 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 MATKP42679 507 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CCNG1P51959 295 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SLC8A3P57103 927 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 NIPAL4Q0D2K0 466 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 LRRC36Q1X8D7 754 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 ATG16L1Q676U5 607 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 ARHGAP17Q68EM7 881 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 NOTUMQ6P988 496 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 ALKAL1Q6UXT8 129 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 B3GALNT2Q8NCR0 500 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 GSTCDQ8NEC7 633 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CCDC124Q96CT7 223 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SLC10A4Q96EP9 437 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 MFSD3Q96ES6 412 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 TTC1Q99614 292 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 MED10Q9BTT4 135 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CCDC106Q9BWC9 280 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 YIPF3Q9GZM5 350 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 KCNK4Q9NYG8 393 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 G3BP2Q9UN86 482 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 YJEFN3A6XGL0 299 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 E7ENQ6 273 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 KLF11O14901 512 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 NVLO15381 856 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SNAPC2Q13487 334 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 ITGA9Q13797 1035 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 DCAF4L1Q3SXM0 396 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CERCAMQ5T4B2 595 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 RIPOR1Q6ZS17 1223 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 GPR142Q7Z601 462 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 USP33Q8TEY7 942 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 ATP2A3Q93084 1043 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CELF6Q96J87 481 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SYT15Q9BQS2 421 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms