RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ITIH4Q14624 930 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PPP1R7Q15435 360 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TPGS2Q68CL5 300 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TLDC1Q6P9B6 456 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TMC7Q7Z402 723 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RFX6Q8HWS3 928 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SCN4BQ8IWT1 228 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PLD5Q8N7P1 536 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 CCDC89Q8N998 374 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PCDH19Q8TAB3 1148 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SPPL3Q8TCT6 385 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SNF8Q96H20 258 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SEC16BQ96JE7 1060 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SAMD11Q96NU1 681 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 KCTD15Q96SI1 283 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 FMO2Q99518 471 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TCF25Q9BQ70 676 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 CALN1Q9BXU9 219 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RXFP1Q9HBX9 757 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PCDH9Q9HC56 1237 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PIGVQ9NUD9 493 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 NAALADL1Q9UQQ1 740 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SSX2IPQ9Y2D8 614 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SLC27A5Q9Y2P5 690 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TMA7Q9Y2S6 64 aaKnown RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 SNX24Q9Y343 169 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 IRAK3Q9Y616 596 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 M0QYT0 321 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 LIN7AO14910 233 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 SOAT2O75908 522 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 CXCL14O95715 111 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 HAPLN1P10915 354 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 ATF2P15336 505 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PECAM1P16284 738 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 ITIH2P19823 946 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 CXCR3P49682 368 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 GPR15P49685 360 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SEC24CP53992 1094 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 KRT81Q14533 505 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RAB30Q15771 203 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 UAP1Q16222 522 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 DDR2Q16832 855 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 MGAT5BQ3V5L5 792 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SCYL2Q6P3W7 929 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RINLQ6ZS11 566 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 HOOK3Q86VS8 718 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 FAM131BQ86XD5 332 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TDHQ8IZJ6 230 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SCAMP5Q8TAC9 235 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 POF1BQ8WVV4 589 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RTP4Q96DX8 246 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SEPT5Q99719 369 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 FAM118BQ9BPY3 351 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TRIM31Q9BZY9 425 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 PPANQ9NQ55 473 aaKnown RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 ENTPD7Q9NQZ7 604 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TLR9Q9NR96 1032 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 AFF4Q9UHB7 1163 aaKnown RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 TPX2Q9ULW0 747 aaKnown RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 SCML2Q9UQR0 700 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 GRM6O15303 877 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 SEC24AO95486 1093 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 F9P00740 461 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 ZFXP17010 805 aaPredicted RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 CA8P35219 290 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 HSD17B3P37058 310 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 ZNF135P52742 658 aaPredicted RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 PLTPP55058 493 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 RPL10AP62906 217 aaKnown RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 CAV1Q03135 178 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 DEUP1Q05D60 604 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CAMK1Q14012 370 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 KCTD19Q17RG1 926 aaPredicted RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 SDHAF4Q5VUM1 108 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 BSPRYQ5W0U4 402 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 EGFLAMQ63HQ2 1017 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 MSANTD2Q6P1R3 559 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CPLX4Q7Z7G2 160 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 SCD5Q86SK9 330 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 TAC4Q86UU9 113 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 MRPL43Q8N983 215 aaKnown RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 GLIS1Q8NBF1 620 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CCDC197Q8NCU1 140 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 BBOF1Q8ND07 529 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CCT6BQ92526 530 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CHMP6Q96FZ7 201 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 SPATA17Q96L03 361 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CEP295NLQ96MC4 621 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 CSPG4P5Q96PW8 444 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 NSRP1Q9H0G5 558 aaKnown RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 ADAM7Q9H2U9 754 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 EPB41L4BQ9H329 900 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 DHX35Q9H5Z1 703 aaKnown RBP9.13□□□□□ -0.95
DDB1-213ENST00000539332 HAUS2Q9NVX0 235 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 COMMD8Q9NX08 183 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 HSFX1Q9UBD0 423 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms