RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 DENND1CQ8IV53 801 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 CCDC50Q8IVM0 306 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 MFSD6LQ8IWD5 586 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 KATNAL2Q8IYT4 538 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 HJURPQ8NCD3 748 aaPredicted RBP10.58□□□□□ -0.72
CLPB-210ENST00000539148 TTC16Q8NEE8 873 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.58□□□□□ -0.72
CLPB-210ENST00000539148 ATXN2LQ8WWM7 1075 aaKnown RBP10.58□□□□□ -0.72
CLPB-210ENST00000539148 HSPH1Q92598 858 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 BTBD6Q96KE9 485 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 FCRL2Q96LA5 508 aaPredicted RBP10.58□□□□□ -0.72
CLPB-210ENST00000539148 FERMT1Q9BQL6 677 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 COL25A1Q9BXS0 654 aaPredicted RBP10.58□□□□□ -0.72
CLPB-210ENST00000539148 TRIM7Q9C029 511 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 SIK2Q9H0K1 926 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 CARD9Q9H257 536 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 DHX35Q9H5Z1 703 aaKnown RBP10.58□□□□□ -0.72
CLPB-210ENST00000539148 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLPB-210ENST00000539148 OR12D3Q9UGF7 316 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 FZD10Q9ULW2 581 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 TFR2Q9UP52 801 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 EFR3BQ9Y2G0 817 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 CAPN6Q9Y6Q1 641 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 NCOR1O75376 2440 aa10.58□□□□□ -0.72
CLPB-210ENST00000539148 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 GRXCR2A6NFK2 248 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 CCDC188H7C350 402 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 TJP3O95049 919 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 KRT1P04264 644 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 RARAP10276 462 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 SERPINB6P35237 376 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 GJC1P36383 396 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 PGFP49763 221 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 CDH6P55285 790 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 TPI1P60174 286 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 PFKPQ01813 784 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 SLC25A11Q02978 314 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 ZNF77Q15935 545 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 DPYSL2Q16555 572 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 TFDP3Q5H9I0 405 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 PPP6R3Q5H9R7 873 aaPredicted RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 STXBP5Q5T5C0 1151 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 C1orf228Q6PIY5 440 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 HDXQ7Z353 690 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 KRT222Q8N1A0 295 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 CPA6Q8N4T0 437 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 LZTR1Q8N653 840 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 IRF7Q92985 503 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 TBC1D31Q96DN5 1066 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 HES6Q96HZ4 224 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 SLC22A12Q96S37 553 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 ZNF670Q9BS34 389 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 SNRNP25Q9BV90 132 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 TRMT61BQ9BVS5 477 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 CALN1Q9BXU9 219 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 PARD6BQ9BYG5 372 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 VIPAS39Q9H9C1 493 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 GKN1Q9NS71 199 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 HAUS2Q9NVX0 235 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 DUS2Q9NX74 493 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 PPARGC1AQ9UBK2 798 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 STOML2Q9UJZ1 356 aa10.57□□□□□ -0.72
CLPB-210ENST00000539148 AGO1Q9UL18 857 aaKnown RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 TTC7AQ9ULT0 858 aaPredicted RBP10.57□□□□□ -0.72
CLPB-210ENST00000539148 HEPACAM2A8MVW5 462 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 EEF2KO00418 725 aaKnown RBP10.56□□□□□ -0.72
CLPB-210ENST00000539148 CHADO15335 359 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 CREB3O43889 395 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 CLDN11O75508 207 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 FTCDO95954 541 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 TACR2P21452 398 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 KCNQ1P51787 676 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 CLCN6P51797 869 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 PITX1P78337 314 aaPredicted RBP10.56□□□□□ -0.72
CLPB-210ENST00000539148 FCHO2Q0JRZ9 810 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 SH3PXD2AQ5TCZ1 1133 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 Q6ZNB5 142 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 CREG2Q8IUH2 290 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 TTC13Q8NBP0 860 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 ACTRT1Q8TDG2 376 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 CSGALNACT1Q8TDX6 532 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 OSCP1Q8WVF1 389 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 CD101Q93033 1021 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 ZFRQ96KR1 1074 aaKnown RBP10.56□□□□□ -0.72
CLPB-210ENST00000539148 ZSWIM3Q96MP5 696 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 RUNDC3BQ96NL0 473 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 RPRD1AQ96P16 312 aaPredicted RBP10.56□□□□□ -0.72
CLPB-210ENST00000539148 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
CLPB-210ENST00000539148 MYADMQ96S97 322 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 SLC2A11Q9BYW1 496 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 ZYG11BQ9C0D3 744 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
CLPB-210ENST00000539148 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
CLPB-210ENST00000539148 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.55□□□□□ -0.72
CLPB-210ENST00000539148 A0A1B0GVM2 712 aa10.55□□□□□ -0.72
CLPB-210ENST00000539148 TCAF2A6NFQ2 919 aa10.55□□□□□ -0.72
CLPB-210ENST00000539148 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.55□□□□□ -0.72
CLPB-210ENST00000539148 ANHXE9PGG2 379 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms