RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MAML1Q92585 1016 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 CCT8L2Q96SF2 557 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 VN1R3Q9BXE9 311 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-205ENST00000538545 TEX264Q9Y6I9 313 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 XIRP2A4UGR9 3374 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 MTMR11A4FU01 709 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 E7ESA3 106 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 TMEM189-UBE2V1I3L0A0 370 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 ACRP10323 421 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 ZFXP17010 805 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 KRT15P19012 456 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 NR2C2P49116 596 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PRMT2P55345 433 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 SESN2P58004 480 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 ZBTB17Q13105 803 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 STAT4Q14765 748 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 RASIP1Q5U651 963 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 TRMT10BQ6PF06 316 aaKnown RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 NLRP14Q86W24 1093 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 AUTS2Q8WXX7 1259 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PGAP3Q96FM1 320 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 ZNF419Q96HQ0 510 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PAFAH2Q99487 392 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PRDM5Q9NQX1 630 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 INTS9Q9NV88 658 aaKnown RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PCDHB5Q9Y5E4 795 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 DFFAO00273 331 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 CHADO15335 359 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 TAF10Q12962 218 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 ARL13BQ3SXY8 428 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 MICALCLQ6ZW33 695 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 DCP1BQ8IZD4 617 aaKnown RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 NTAN1Q96AB6 310 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 FCRL2Q96LA5 508 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PAIP2Q9BPZ3 127 aaKnown RBP14.54□□□□□ -0.08
ACTN1-205ENST00000538545 EPN3Q9H201 632 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 ABCC13Q9NSE7 274 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 PATJQ8NI35 1801 aa14.54□□□□□ -0.08
ACTN1-205ENST00000538545 CCDC78A2IDD5 438 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SCAMP3O14828 347 aaKnown RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 GCATO75600 419 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 DEFB103AP81534 67 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 PRKD1Q15139 912 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 ZNF280DQ6N043 979 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 TFAP2DQ7Z6R9 452 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 VSIG1Q86XK7 387 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 ATP11CQ8NB49 1132 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 CCDC77Q9BR77 488 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SMYD2Q9NRG4 433 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SAGE1Q9NXZ1 904 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 NEU3Q9UQ49 428 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 PRRC2BQ5JSZ5 2229 aaKnown RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 A0A0A0MRY4 1105 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 CFAP69A5D8W1 941 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 IGLV3-25P01717 112 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 FGFR3P22607 806 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SCAPQ12770 1279 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 XRCC4Q13426 336 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 MRPL58Q14197 206 aaKnown RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 PAFAH1B3Q15102 231 aaKnown RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 PSMD5Q16401 504 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SPOUT1Q5T280 376 aaKnown RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 CIR1Q86X95 450 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 CTAGE3PQ8IX95 158 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 ZNF473Q8WTR7 871 aaKnown RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 IRGQQ8WZA9 623 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SPATA13Q96N96 652 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SLC9A7Q96T83 725 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 FOXP3Q9BZS1 431 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 CCSER2Q9H7U1 834 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 KLHL8Q9P2G9 620 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-205ENST00000538545 PRDM4Q9UKN5 801 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 VANGL2Q9ULK5 521 aa14.53□□□□□ -0.08
ACTN1-205ENST00000538545 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.083e-6■■■■■ 155
ACTN1-205ENST00000538545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.52□□□□□ -0.08
ACTN1-205ENST00000538545 WDR27A2RRH5 827 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 C5orf60A6NFR6 353 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 ZNF487B1APH4 448 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 ZBTB24O43167 697 aaPredicted RBP14.52□□□□□ -0.08
ACTN1-205ENST00000538545 DNAJB2P25686 324 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 OR1D2P34982 312 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 CASC4Q6P4E1 433 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 PAWRQ96IZ0 340 aaKnown RBP14.52□□□□□ -0.08
ACTN1-205ENST00000538545 TTC25Q96NG3 672 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 GORASP1Q9BQQ3 440 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 ELAC1Q9H777 363 aaKnown RBP14.52□□□□□ -0.08
ACTN1-205ENST00000538545 TMEM39AQ9NV64 488 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 ZC3H7BQ9UGR2 993 aaKnown RBP14.52□□□□□ -0.08
ACTN1-205ENST00000538545 EYSQ5T1H1 3165 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 DOCK6Q96HP0 2047 aa14.52□□□□□ -0.08
ACTN1-205ENST00000538545 SYN3O14994 580 aa14.52□□□□□ -0.09
ACTN1-205ENST00000538545 F9P00740 461 aa14.52□□□□□ -0.09
ACTN1-205ENST00000538545 ABHD2P08910 425 aa14.52□□□□□ -0.09
ACTN1-205ENST00000538545 PTPN3P26045 913 aa14.52□□□□□ -0.09
ACTN1-205ENST00000538545 EIF4EBP2Q13542 120 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-205ENST00000538545 ARTNQ5T4W7 220 aa14.52□□□□□ -0.09
ACTN1-205ENST00000538545 FBXO32Q969P5 355 aa14.52□□□□□ -0.09
ACTN1-205ENST00000538545 MYEOVQ96EZ4 313 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms