RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 GSTCDQ8NEC7 633 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 RAB3IL1Q8TBN0 382 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 RNF139Q8WU17 664 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TFB1MQ8WVM0 346 aaKnown RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 HTR3CQ8WXA8 447 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 WNT8BQ93098 351 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 KLHL29Q96CT2 875 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PGAP3Q96FM1 320 aaPredicted RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 CFAP36Q96G28 342 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 OXNAD1Q96HP4 312 aaPredicted RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 AP5M1Q9H0R1 490 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MANSC1Q9H8J5 431 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 CD248Q9HCU0 757 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 SAR1AQ9NR31 198 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 RNF19AQ9NV58 838 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MOCS1Q9NZB8 636 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 IGSF9Q9P2J2 1179 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 STAP1Q9ULZ2 295 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PHF24Q9UPV7 400 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MFHAS1Q9Y4C4 1052 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TRPV2Q9Y5S1 764 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 RAD54BQ9Y620 910 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 SCN10AQ9Y5Y9 1956 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TCF20Q9UGU0 1960 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 HMX2A2RU54 273 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 GRXCR1A8MXD5 290 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 GOLGA8RI6L899 631 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 CYB561D2O14569 222 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 KPNA6O60684 536 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 HNRNPCL1O60812 293 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 OPHN1O60890 802 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 KRT37O76014 449 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 BEST1O76090 585 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 FYNP06241 537 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 APRTP07741 180 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 CLTBP09497 229 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 PYGBP11216 843 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 DNAJB2P25686 324 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 SLC8A1P32418 973 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 PBX2P40425 430 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 SERPINB4P48594 390 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 HCAR3P49019 387 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 MNAT1P51948 309 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 DAOAP59103 153 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 MRPS6P82932 125 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 MGAT3Q09327 533 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 WASHC5Q12768 1159 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 SETDB1Q15047 1291 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 CTC1Q2NKJ3 1217 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 FNDC1Q4ZHG4 1894 aaPredicted RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 PLEKHG4Q58EX7 1191 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 STXBP5Q5T5C0 1151 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 C1orf53Q5VUE5 145 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 FYB2Q5VWT5 728 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 WSCD1Q658N2 575 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 ZNF449Q6P9G9 518 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 CDHR3Q6ZTQ4 885 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 BHLHA9Q7RTU4 235 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 MRPL10Q7Z7H8 261 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 RPAINQ86UA6 219 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 FAM35AQ86V20 835 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 FAM131BQ86XD5 332 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 CCNJLQ8IV13 435 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 TRIM42Q8IWZ5 723 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 SCML4Q8N228 414 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 PYROXD2Q8N2H3 581 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 MPP5Q8N3R9 675 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 PPM1NQ8N819 430 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 ZMIZ2Q8NF64 920 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 RFWD2Q8NHY2 731 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 UTP4Q969X6 686 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 SLC7A6OSQ96CW6 309 aaPredicted RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 ERP27Q96DN0 273 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 LRRC37BQ96QE4 947 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 KLF6Q99612 283 aaPredicted RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 C12orf65Q9H3J6 166 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 TLE6Q9H808 572 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 CRTAC1Q9NQ79 661 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 XPNPEP3Q9NQH7 507 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 SLC38A7Q9NVC3 462 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 LNPEPQ9UIQ6 1025 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 PLLPQ9Y342 182 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 IKBKGQ9Y6K9 419 aa9.52□□□□□ -0.89
DDB1-211ENST00000538280 ZNF638Q14966 1978 aaKnown RBP9.52□□□□□ -0.89
DDB1-211ENST00000538280 HHLA1C9JL84 531 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 CLDN5O00501 218 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 COPEO14579 308 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 KIAA0355O15063 1070 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 UGT1A9O60656 530 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 ADAMTS4O75173 837 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 KRT38O76015 456 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 FAM200BP0CF97 657 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 GRIA1P42261 906 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 LHX1P48742 406 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 ZNF135P52742 658 aaPredicted RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 SLC8A3P57103 927 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 SARNPP82979 210 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 BEX3Q00994 111 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms