RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ZNF276Q8N554 614 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 OR2T34Q8NGX1 318 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 VCPIP1Q96JH7 1222 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 DPH1Q9BZG8 443 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 RSPH9Q9H1X1 276 aaPredicted RBP11.63□□□□□ -0.55
CLPB-208ENST00000538021 ERVMER34-1Q9H9K5 563 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 PNPLA8Q9NP80 782 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 CLIC4Q9Y696 253 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 PTPN13Q12923 2485 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 TRIM38O00635 465 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 EIF3DO15371 548 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLPB-208ENST00000538021 SIN3BO75182 1162 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 HARS2P49590 506 aaKnown RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 ST8SIA6P61647 398 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 EHHADHQ08426 723 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 PDE4CQ08493 712 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 CST6Q15828 149 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 HS1BP3Q53T59 392 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 KANSL1Q7Z3B3 1105 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 SPATS2Q86XZ4 545 aaKnown RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 MMAAQ8IVH4 418 aaKnown RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 FAM217AQ8IXS0 508 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 OR14C36Q8NHC7 312 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 ZNF507Q8TCN5 953 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 SNRNP27Q8WVK2 155 aaKnown RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 TMA16Q96EY4 203 aaKnown RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 DEPDC7Q96QD5 511 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 TWNKQ96RR1 684 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 THSD1Q9NS62 852 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 FBXO2Q9UK22 296 aaPredicted RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 USP3Q9Y6I4 520 aa11.62□□□□□ -0.55
CLPB-208ENST00000538021 ARID1BQ8NFD5 2236 aaPredicted RBP11.62□□□□□ -0.55
CLPB-208ENST00000538021 A0A087X0B3 334 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 LRRIQ3A6PVS8 624 aaPredicted RBP11.61□□□□□ -0.55
CLPB-208ENST00000538021 EXOC3O60645 756 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 CSO75390 466 aaKnown RBP11.61□□□□□ -0.55
CLPB-208ENST00000538021 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
CLPB-208ENST00000538021 VNN1O95497 513 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 C4BPAP04003 597 aaKnown RBP11.61□□□□□ -0.55
CLPB-208ENST00000538021 SLC8A1P32418 973 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 CD70P32970 193 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 LSSP48449 732 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 CCR5P51681 352 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 AP3M2P53677 418 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 ZNF211Q13398 564 aaPredicted RBP11.61□□□□□ -0.55
CLPB-208ENST00000538021 SGSM1Q2NKQ1 1148 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 SPOPLQ6IQ16 392 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 TMC6Q7Z403 805 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 BRAPQ7Z569 592 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 ARHGAP18Q8N392 663 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 PDILTQ8N807 584 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLPB-208ENST00000538021 MFSD2AQ8NA29 543 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 PLEKHO2Q8TD55 490 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 PLD4Q96BZ4 506 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 OSBPL2Q9H1P3 480 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 POLR1BQ9H9Y6 1135 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
CLPB-208ENST00000538021 SRPRBQ9Y5M8 271 aaKnown RBP11.61□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 K7ENP7 123 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 FFAR2O15552 330 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 OPA1O60313 960 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 NTRK1P04629 796 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 RBMS1P29558 406 aaKnown RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 ASPAP45381 313 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 PSMD8P48556 350 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 SGSHP51688 502 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 ZNF445P59923 1031 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 YWHAGP61981 247 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLPB-208ENST00000538021 ASIC1P78348 528 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 CEBPZQ03701 1054 aaKnown RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 TRIP4Q15650 581 aaPredicted RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 HNRNPA1L2Q32P51 320 aaKnown RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 C3orf38Q5JPI3 329 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 CDCP2Q5VXM1 449 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 INO80CQ6PI98 192 aaPredicted RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 CCDC81Q6ZN84 652 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLPB-208ENST00000538021 EPM2AIP1Q7L775 607 aaPredicted RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 KIAA0907Q7Z7F0 614 aaPredicted RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 PRPF39Q86UA1 669 aaKnown RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
CLPB-208ENST00000538021 WFDC5Q8TCV5 224 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 NT5C1AQ9BXI3 368 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 DUSP16Q9BY84 665 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 ABCG4Q9H172 646 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 ASCL3Q9NQ33 180 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 FZD4Q9ULV1 537 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
CLPB-208ENST00000538021 A0A1B0GVM2 712 aa11.59□□□□□ -0.55
CLPB-208ENST00000538021 MAGEC1O60732 1142 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms