RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 MFAP3P55082 362 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 HUNKP57058 714 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 CTBSQ01459 385 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 PPP3CAQ08209 521 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 CYP2A13Q16696 494 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 SPRYD7Q5W111 196 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 FRMD7Q6ZUT3 714 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 MCOLN2Q8IZK6 566 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 TRUB1Q8WWH5 349 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 APOL6Q9BWW8 343 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 PORCNQ9H237 461 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 XAB2Q9HCS7 855 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 OLAHQ9NV23 265 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 SLC8A2Q9UPR5 921 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ATE1O95260 518 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ITGAVP06756 1048 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ZNF26P17031 533 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 KPNA1P52294 538 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 GTF2A2P52657 109 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 MRPS22P82650 360 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 MRPS5P82675 430 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 MYBPC2Q14324 1141 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 NR1D2Q14995 579 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 TTC39BQ5VTQ0 682 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 XKR5Q6UX68 686 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 STXBP4Q6ZWJ1 553 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ARCQ7LC44 396 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ZNF720Q7Z2F6 126 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 NAT8LQ8N9F0 302 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 ZNF420Q8TAQ5 688 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 PIWIL2Q8TC59 973 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 SERPINI1Q99574 410 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 DOK1Q99704 481 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 PKP2Q99959 881 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 LXNQ9BS40 222 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 OSBPL11Q9BXB4 747 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 CLK4Q9HAZ1 481 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 FBXO40Q9UH90 709 aa11.66□□□□□ -0.54
SEMA4D-221ENST00000537934 PRSS51A0A1B0GVH4 220 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 KRBA1A5PL33 1030 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 UNCXA6NJT0 531 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 TRIM64CA6NLI5 447 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 KDM1AO60341 852 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 CCNE2O96020 404 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 BPGMP07738 259 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 GCLMP48507 274 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 VAMP7P51809 220 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 BMXP51813 675 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 ALCAMQ13740 583 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 ANKRD22Q5VYY1 191 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 KAZNQ674X7 775 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 TRMT1LQ7Z2T5 733 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 RCOR2Q8IZ40 523 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 SDR16C5Q8N3Y7 309 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 ADAMTS16Q8TE57 1224 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 CPT1BQ92523 772 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 TRIM11Q96F44 468 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 ZNF597Q96LX8 424 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 PTPN18Q99952 460 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 RTKNQ9BST9 563 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 EHD1Q9H4M9 534 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 RPF2Q9H7B2 306 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 XPNPEP1Q9NQW7 623 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 MKS1Q9NXB0 559 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 KLHL3Q9UH77 587 aa11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 PRPF19Q9UMS4 504 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-221ENST00000537934 CFAP99D6REC4 459 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 SGK1O00141 431 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 KPNA4O00629 521 aaPredicted RBP11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 CYB561D2O14569 222 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 KRT10P13645 584 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 SP4Q02446 784 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 PEX5LQ8IYB4 626 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 TAMM41Q96BW9 452 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 FIZ1Q96SL8 496 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 FERMT1Q9BQL6 677 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 PARVGQ9HBI0 331 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 ERVK-11Q9UQG0 969 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 AP4S1Q9Y587 144 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 SLC30A1Q9Y6M5 507 aa11.65□□□□□ -0.55
SEMA4D-221ENST00000537934 LOC100653049A0A140TA62 436 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TRIM49D1C9J1S8 452 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 H3BMQ9 156 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 MGEA5O60502 916 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 KRT34O76011 436 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 IFNB1P01574 187 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 UNGP13051 313 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 PEX3P56589 373 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 FLOT2Q14254 428 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 BBS9Q3SYG4 887 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms